DR406157

Overview
NameDR406157
Unique NameDR406157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13714 contig Csv1_Contig13714:428..1168. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.988e-45
Identity = 91/148 (61.49%), Postives = 111/148 (75.00%), Query Frame = 3
Query:  105 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 548
            RR+NVFDP + D WDPFDG   S +    +S R+T+ FANAR+DWKETP++HVFKADLPG++          G +L +SG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKASMENGVLTVT            AIEISG
Sbjct:    5 RRSNVFDPFA-DFWDPFDGVFRSLVP--ATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.597e-45
Identity = 93/145 (64.14%), Postives = 115/145 (79.31%), Query Frame = 3
Query:   75 MSLIPSIF--GGRRTNVFDPVSLD-VWDPFDGFLSSALTNAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 494
            MSLIP+ +   GRR+N+FDP SLD +WDPF G L S L+  P S  A ET+ FANARIDWKETP+AHVFKADLPG++          G +L++SG+R++E+EEKND WHRVERSSG+F+R+FRLP+NAKV+QVKA MENGVLTVT
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPFFG-LPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVT 144          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.868e-45
Identity = 92/155 (59.35%), Postives = 108/155 (69.68%), Query Frame = 3
Query:  105 RRTNVFDPVSLDVWDPFDGF-------LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 548
            RR N FDP SLD+WDP DGF        SS+ +  P +  + + FA ARIDWKETP+ HVFKAD+PGL+          G ILQ+SGERS+EQEEK+DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVT            +I+ISG
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.289e-44
Identity = 95/161 (59.01%), Postives = 117/161 (72.67%), Query Frame = 3
Query:   75 MSLIPSIFGGRRTN-VFDPVSLDVWDPFD--GFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 548
            MSLIP IFG RR++ +FDP S+DV+DPF   GF S+       ++ E+S FAN RIDWKETP+ HVFK DLPGL+           R+LQ+SGER+ E+E+KNDKWHR+ERSSGKF+RRFRLP+NAK++QVKASMENGVLTVT            +IEISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPST-------NSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.750e-44
Identity = 90/159 (56.60%), Postives = 111/159 (69.81%), Query Frame = 3
Query:   75 MSLIPSIFGG-RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 548
            MS+IPS F   RR+N+FDP SLDVWDPF    SS+L+      RE S   NAR+DW+ETP+AHVFKADLPGL+            +L++SGER  E+E+KND WHRVERSSG+F RRFRLP+N K++QVKA+MENGVLTVT            +I+ISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLS------RENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.687e-42
Identity = 90/149 (60.40%), Postives = 109/149 (73.15%), Query Frame = 3
Query:  105 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 548
            RR+NVFDP + D+W DPFD F S     +  S+ ET+ FANAR+DWKETP+AHVFK DLPG++          G +L VSGERS+E+E+KNDKWHRVERSSGKF+RRFRLP++AKVE+VKA +ENGVLTVT            AIEISG
Sbjct:    5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS-ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 151          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.334e-41
Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 3
Query:  123 DPVSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 545
            DP SLDVWDPF  F  +++  +A S  +E S F + RIDWKETP+AHVFKADLPGL+           R+LQ+SGER+ E+E+KND+WHRVERSSGKF+RRFRLP+NAK++QVKA+MENGVLTVT            +IEIS
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVKSIEIS 142          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.275e-41
Identity = 89/149 (59.73%), Postives = 107/149 (71.81%), Query Frame = 3
Query:  105 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEISG 548
            RRTNVFDP + D+W DPFD F  S +        ET+ FANAR+DWKETP+AHVFKADLPG++          G +L VSGER+KE+E+KNDKWHRVERSSGKF+RRFRL ++AKVE+VKA +ENGVLTVT            AI+ISG
Sbjct:    5 RRTNVFDPFA-DLWADPFDTF-RSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG 151          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.558e-40
Identity = 83/142 (58.45%), Postives = 100/142 (70.42%), Query Frame = 3
Query:   75 MSLIPSIFGGRR--TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 494
            MSLIPS FG  R   ++FDP SLDVWDPF       L    S + ETS   NAR+DWKET +AHVFKADLPG++            +L++SGER  E+EEK D WHRVERSSG+F R+F+LP+N K++QVKASMENGVLTVT
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPF-----KELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVT 137          
BLAST of DR406157 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.630e-39
Identity = 85/143 (59.44%), Postives = 100/143 (69.93%), Query Frame = 3
Query:   75 MSLIPSIFGGRR---TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQVSGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 494
            MSLIPS FG  R    N+FDP SLDVWDPF           PSS+  +S  ANAR+DWKET +AHVFKADLPG++            +L++SGER  E+EEK D WHRVERSSG F R+FRLP+N K++QVKASMENGVLTVT
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKEL------QFPSSS--SSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVT 135          
The following BLAST results are available for this feature:
BLAST of DR406157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HS16C_ORYSJ1.988e-4561.4916.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HSP11_CHERU2.597e-4564.1418.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS177_ORYSJ9.868e-4559.3517.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP11_SOLLC1.289e-4459.0117.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HS17B_ARATH3.750e-4456.6017.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HS16A_WHEAT2.687e-4260.4016.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HSP11_MEDSA1.334e-4159.1518.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS16B_WHEAT2.275e-4159.7316.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HS178_ARATH9.558e-4058.4517.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17A_ARATH1.630e-3959.4417.6 kDa class I heat shock protein 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248O14 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248O14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406157 ID=DR406157; Name=DR406157; organism=Citrus sinensis; type=EST; length=744bp
GGGGATCTTCAAATTGATTGATCAAAGCATTTCCGAAGTTGTTGAGCATT
TAATTAGCGTCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTCGG
TGGCCGAAGAACCAACGTGTTCGATCCAGTTTCATTAGATGTATGGGATC
CTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCGGCT
AGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACTCC
TCAGGCTCACGTATTCAAAGCTGATCTTCCAGGGCTGAGGAAAGAAGAAG
TAAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCAGGTAAGCGGAGAGAGG
AGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAGGAG
CAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTGG
AACAGGTTAAGGCCAGCATGGAGAATGGTGTGCTCACAGTCACCGTTCCT
AAACAGGAGGAGAAGAAACCTGAAGTTAAGGCTATTGAGATCTCTGGCTA
AGTGATAACTGTAAATGTTTTCAAGATAGTGTCTTTGGTTTGCTAATAAA
TTTGGTACGAAAGCAAAGCCCTTGTGTGTTTGTATGTGTGTGGTGGTGGT
TTGTTTTCTTCCCTTCCCCCTGTTNNNNNNNNNGTGATTATGTTTGTGTG
TTTGCGAGAGCTTCAGGAGCCAGTCTCAAGCGTTGTAACTAGTT
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