DR406141

Overview
NameDR406141
Unique NameDR406141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR406141_ssr733 microsatellite DR406141_ssr733:733..744. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5704 contig Csv1_Contig5704:54..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.218e-62
Identity = 114/211 (54.03%), Postives = 146/211 (69.19%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT-TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P+S+DWRK+G VT VKDQG CGSCW+FST  A+EGIN + T  L+SLSEQELVDCDT  + GC+GG MDYAFE++   GGI TE++YPY   DGTC+++KE    VSIDG+++V E  ++ALL A   QP+SV +    SDFQ Y+ G++ G C  +   +DH V IVGYG+  +G  YW VKNSWG  WG  GY  + R  S + G C I
Sbjct:  127 PASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTE---LDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGI 334          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 1.019e-60
Identity = 112/218 (51.38%), Postives = 148/218 (67.89%), Query Frame = 1
Query:   22 PSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE--NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P S+DWR +G +V PVK+QG CGSCW+FS   A+EGIN +VTG+L+SLSEQELV+C  +  + GC+GG MD AF ++  NGG+DTE DYPYT +DG CN+ K   KVVSIDG++DV  +D   L  AV  QP+SV +     +FQLY SG++ G C  +   +DH V+ VGYG++   G  YW V+NSWG  WG +GY  + R+ +   GKC I  MA
Sbjct:  156 PDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTN---LDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMA 370          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.331e-60
Identity = 114/215 (53.02%), Postives = 150/215 (69.77%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD-TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSD-SALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P+S+DWRK+G VT VKDQG CGSCW+FST  A+EGIN + T  L+SLSEQELVDCD   + GC+GG M+ AFE++   GGI TES+YPYT  +GTC+ +K     VSIDG+++V  +D +ALL A   QP+SV +    SDFQ Y+ G++ GDC+ D   ++H V IVGYG+  +G +YWIV+NSWG  WG  GY  + R+ S + G C I  MA
Sbjct:  129 PASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCNTD---LNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMMA 340          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.270e-60
Identity = 110/209 (52.63%), Postives = 145/209 (69.38%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P S+DWR++G V PVK+QG CGSCW+F    A+EGIN +VTGDLISLSEQ+LVDC T ++GC+GG+   AF+++INNGGI++E  YPYTG +GTC+ TKE   VVSID Y++V  +D   L  AV  QP+SV M  +  DFQLY +GI+ G C+      +H   + G  +EN +DYW VKNSWG +WG  GY  + R+ +   GKC I
Sbjct:    4 PDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCSTRNHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTNGTCD-TKENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGIFTGSCN---ISANHYRTVGGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAESSGKCGI 208          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 3.279e-59
Identity = 111/211 (52.61%), Postives = 145/211 (68.72%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD-TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSD-SALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P S+DWRK+G VT VKDQG CGSCW+FST  A+EGIN + T  L++LSEQELVDCD   + GC+GG M+ AFE++   GGI TES+YPY   +GTC+ +K     VSIDG+++V  +D  ALL A   QP+SV +    SDFQ Y+ G++ GDCS D   ++H V IVGYG+  +G +YWIV+NSWG  WG  GY  + R+ S + G C I
Sbjct:  129 PPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTD---LNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGI 336          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.592e-59
Identity = 116/225 (51.56%), Postives = 146/225 (64.89%), Query Frame = 1
Query:   10 SCE-APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSD--------SALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            SC+  P+S DWRK+G++T VK QG CG  W+FS TGAIE  +A+ TGDL+SLSEQELVDC   S G   G+   +FEWV+ +GGI T+ DYPY   +G C   K + K V+IDGY+ +  SD         A L A ++QPISV +   A DF LYT GIY+G+    PY I+H VL+VGYGS +G DYWI KNSWG  WG DGY +I R+T    G C +N  A
Sbjct:  131 SCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDK-VTIDGYETLIMSDESTESETEQAFLSAILEQPISVSI--DAKDFHLYTGGIYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGMNYFA 352          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.125e-58
Identity = 109/216 (50.46%), Postives = 143/216 (66.20%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITK---EETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYG-SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            + P S+DWR++G VT VKDQG CGSCW+FST  ++EGINA+ TG L+SLSEQEL+DCDT  + GC GG MD AFE++ NNGG+ TE+ YPY    GTCN+ +       VV IDG++DV   S+  L  A   QP+SV +  S   F  Y+ G++ GDC  +   +DH V +VGYG +E+G+ YW VKNSWG SWG  GY  + +D+    G C I
Sbjct:  133 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGDCGTE---LDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGI 345          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.183e-58
Identity = 108/216 (50.00%), Postives = 143/216 (66.20%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITK---EETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYG-SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            + P S+DWR++G VT VKDQG CGSCW+FST  ++EGINA+ TG L+SLSEQEL+DCDT  + GC GG MD AFE++ NNGG+ TE+ YPY    GTCN+ +       VV IDG++DV   S+  L  A   QP+SV +  S   F  Y+ G++ G+C  +   +DH V +VGYG +E+G+ YW VKNSWG SWG  GY  + +D+    G C I
Sbjct:  133 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTE---LDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGI 345          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.075e-58
Identity = 112/210 (53.33%), Postives = 143/210 (68.10%), Query Frame = 1
Query:   25 SSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYG-SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            +S+DWR +G VT VKDQG CGSCW+FST  ++EGIN + TG+L+SLSEQELVDCDT+ + GC+GG MDYAFE++  N GI TE  YPY   DGTC      + VVSIDG++DV   +++AL+ A   QPISV +  S   FQ Y+ G++ G C  +   +DH V IVGYG + +G  YWIVKNSWG  WG  GY  + R  S + GKC I
Sbjct:  132 ASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFIQKN-GITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGRCGTE---LDHGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGI 337          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.075e-58
Identity = 102/210 (48.57%), Postives = 149/210 (70.95%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTC-NITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P S+DWR  G VT VKDQG C SCW+FST GA+EG+N +VTG+L++LSEQ+L++C+  + GC GG ++ A+E+++NNGG+ T++DYPY  ++G C    KE+ K V IDGY+++  +D A L  AV  QP++  +  S+ +FQLY SG+++G C  +   ++H V++VGYG+ENG DYWIVKNS G +WG  GY  + R+ +   G C I
Sbjct:  145 PKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGTCGTN---LNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGI 351          
The following BLAST results are available for this feature:
BLAST of DR406141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CYSEP_RICCO9.218e-6254.03Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP1_ORYSJ1.019e-6051.38Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_VIGMU1.331e-6053.02Vignain OS=Vigna mungo PE=1 SV=1[more]
CPGP1_ZINOF2.270e-6052.63Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CYSEP_PHAVU3.279e-5952.61Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
P34_SOYBN5.592e-5951.56P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CYSP1_HORVU2.125e-5850.46Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CYSP2_HORVU6.183e-5850.00Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP_HEMSP8.075e-5853.33Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CPR4_ARATH8.075e-5848.57Probable cysteine proteinase At4g11320 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248N22 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248N22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406141 ID=DR406141; Name=DR406141; organism=Citrus sinensis; type=EST; length=758bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACCGCCACCACCACCACCTCCA
TCTCCATC
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