DR406141

Overview
NameDR406141
Unique NameDR406141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR406141_ssr733 microsatellite DR406141_ssr733:733..744. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5704 contig Csv1_Contig5704:54..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.475e-51
Identity = 102/217 (47.00%), Postives = 147/217 (67.74%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPY-TGVDGTCNITKEETKVVSIDGYKDVEPSD-SALLCAAVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P ++DWR++  VTPVKDQG CGSC+SFSTTG++EG+ A+ TG L+SLSEQ ++DC ++  + GC+GG M  AFE++I N G+++E  YPY   V+  C   +E +    I  YK++E  D + L  A +  P+SV +  S + FQLYT+G+ Y   CS++   +DH VL VG G++NGEDY+IVKNSWG SWG++GY ++ R+       C I+ MA
Sbjct:  122 PLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKF-QEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSED--LDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARNKD---NNCGISTMA 332          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.475e-51
Identity = 103/215 (47.91%), Postives = 139/215 (64.65%), Query Frame = 1
Query:   25 SSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            + +DWR +G VTPVKDQG CGSCW+FSTTG++EG + L TG LISL+EQ+LVDC       GC+GG+M+ AF+++  N GIDTE+ YPY   DG+C          +  G+ ++       L  AV+   PISV +  + S FQ Y+SG+Y  + S  P Y+DHAVL VGYGSE G+D+W+VKNSW TSWG  GY  ++R+ +     C I  +A
Sbjct:  109 TEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSV-AATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYY-EPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRN---NNCGIATVA 318          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.516e-51
Identity = 101/217 (46.54%), Postives = 141/217 (64.98%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            PS++DWR +  VTPVKDQG CGSCW+F +TG++EG N +  G+L+SLSEQ+LVDC   T S GC GG+   AF++V+  G + TES+YPY   +G C         VSI GY +V   S+SAL  A A   P+++ +  S  DF+ Y SG+YN   C N    +DH VL +GYG+  G+DY++VKNSW T+WG+DGY Y+ R+   +   C +++ A
Sbjct:  310 PSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARN---DNNLCGVSSQA 523          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 3.286e-51
Identity = 99/209 (47.37%), Postives = 125/209 (59.81%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSA-LLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P ++DWRK+G VTPV+ QGSCGSCW+FS    +EGIN + TG L+ LSEQELVDC+  S+GC GGY  YA E+V  N GI   S YPY    GTC   +    +V   G   V+P++   LL A  +QP+SV +      FQLY  GI+ G C      +DHAV  VGYG   G+ Y ++KNSWGT+WG  GY  I R      G C +
Sbjct:  134 PENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTK---VDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGL 338          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 5.605e-51
Identity = 101/215 (46.98%), Postives = 137/215 (63.72%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P S+D+RK+G VTPVK+QG CGSCW+FS+ GA+EG     TG L++LS Q LVDC T +YGC GGYM  AF++V  NGGID+E  YPY G D +C +     K     GY+++   +   L  AV +  PISV +  S + FQ Y+ G+ Y+ +C  D   ++HAVL+VGYG++ G  +WI+KNSWG SWG  GY  + R+ +     C I  MA
Sbjct:  116 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKN---NACGITNMA 324          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 9.561e-51
Identity = 100/209 (47.85%), Postives = 136/209 (65.07%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGS-ENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            P S+DWR +G VT VKDQG CGSCW+FS+TGA+EG +   +G L+SLSEQ LVDC T   + GC+GG MD AF ++ +NGGIDTE  YPY  +D +C+  K  T   +  G+ D+   D   +  AV    P+SV +  S   FQ Y+ G+YN +   D   +DH VL+VG+G+ E+GEDYW+VKNSWGT+WG  G+  + R+   + G
Sbjct:  155 PKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNK-GTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYN-EPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCG 361          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.561e-51
Identity = 99/215 (46.05%), Postives = 137/215 (63.72%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P S+D+RK+G VTPVK+QG CGSCW+FS+ GA+EG     TG L++LS Q LVDC + +YGC GGYM  AF++V  NGGID+E  YPY G D +C +     K     GY+++   +   L  AV +  P+SV +  S + FQ Y+ G+ Y+ +C  D   ++HAVL+VGYG++ G  YWI+KNSWG SWG  GY  + R+ +     C I  +A
Sbjct:  116 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKN---NACGITNLA 324          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.249e-50
Identity = 106/213 (49.77%), Postives = 134/213 (62.91%), Query Frame = 1
Query:   19 APSS--LDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSY---GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            AP S  +DWR +G VTPVKDQG CGSCW+FSTTG IEG + L TG L+SLSEQ+LVDC   SY   GC+GG+++ A  +V +NGG+DTES YPY   D TC      T   +  GY  +     + L  A +   PISV +  S   FQ Y +G+ Y   CS+    +DHAVL VGYGSE G+D+W+VKNSW TSWG  GY  + R+ +   G
Sbjct:  103 APESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTCRF-NSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSS--QLDHAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARNRNNNCG 312          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.631e-50
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRD 615
            P S+DWR++G VTPVK+QG CGSCW+FS +G +EG   L TG LISLSEQ LVDC     + GC+GG MD+AF+++  NGG+D+E  YPY   DG+C   + E  V +  G+ D+   + AL+ A A   PISV M  S    Q Y+SGI Y  +CS+    +DH VL+VGYG E    N   YW+VKNSWG+ WG++GY  I +D
Sbjct:  115 PKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSK--NLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKD 317          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.197e-50
Identity = 107/215 (49.77%), Postives = 143/215 (66.51%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP-VKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCN-ITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGE-DYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P  +DWR+RG V P VK QG CGSCW+F+ TGA+EGIN + TG+L+SLSEQEL+DCD    ++GC GG   +AFE++  NGGI ++  Y YTG D   C  I  + T+VV+I+G++ V  +D   L  AV  QPISV +  SA++   Y SG+Y G CSN   + DH VLIVGYG+ + E DYW+++NSWG  WG  GY  + R+     GKCA+
Sbjct:  128 PDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMI--SAANMSDYKSGVYKGACSN--LWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEPTGKCAV 338          
The following BLAST results are available for this feature:
BLAST of DR406141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CYSP3_DICDI1.475e-5147.00Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSP2_HOMAM1.475e-5147.91Digestive cysteine proteinase 2 OS=Homarus america... [more]
CFAD_DICDI2.516e-5146.54Counting factor associated protein D OS=Dictyostel... [more]
PAPA3_CARPA3.286e-5147.37Caricain OS=Carica papaya PE=1 SV=2[more]
CATK_MOUSE5.605e-5146.98Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATL_DROME9.561e-5147.85Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATK_RAT9.561e-5146.05Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CYSP1_HOMAM1.249e-5049.77Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATL1_MOUSE1.631e-5049.51Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CPR2_ARATH6.197e-5049.77Probable cysteine proteinase At3g43960 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248N22 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248N22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406141 ID=DR406141; Name=DR406141; organism=Citrus sinensis; type=EST; length=758bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACCGCCACCACCACCACCTCCA
TCTCCATC
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