DR406141

Overview
NameDR406141
Unique NameDR406141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR406141_ssr733 microsatellite DR406141_ssr733:733..744. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5704 contig Csv1_Contig5704:54..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.866e-46
Identity = 96/218 (44.04%), Postives = 135/218 (61.93%), Query Frame = 1
Query:   22 PSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            PSS+DWRK+G +V+PVK+QG+C SCW+FSTTGA+E   A+ +G ++SL+EQ+LVDC     ++GC GG    AFE+++ N GI  E  YPY G D +C    ++  V  +    ++  +D A +  AV    P+S        DF +Y SG+Y+   C   P  ++HAVL VGYG +NG  YWIVKNSWG+ WG +GYF I R  ++    C + A A
Sbjct:  115 PSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKA-VAFVKNVVNITLNDEAAMVEAVALYNPVSFAF-EVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNM----CGLAACA 326          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.437e-46
Identity = 97/212 (45.75%), Postives = 129/212 (60.85%), Query Frame = 1
Query:   25 SSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            + +DWR +G VTPVKDQG CGSCW+FS   A+EG + L TGDL+SLSEQ LVDC ++  + GC+GG+   A++++I N GIDTES YPY  +D  C          ++  Y +    D + L  AVQ   P+SV +    S F  Y  G+Y  + + D +Y +HAV  VGYG++ NG DYWIVKNSWG  WG  GY  + R+       CAI
Sbjct:  108 ADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIG-ATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYY-EPNCDSWYANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARNRD---NNCAI 314          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.157e-46
Identity = 90/209 (43.06%), Postives = 128/209 (61.24%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSD-SALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P S+DWR  G V  VK+QG CG CW+F+    +EGI  +  G+L+ LSEQE++DC   SYGC GG+++ A++++I+N G+ T+ +YPY    GTCN          I GY  V  +D S ++ A   QPI+  +  S  +FQ Y  G+Y+G C    + ++HA+ I+GYG ++   YWIV+NSWG+SWG  GY  I RD S   G C I
Sbjct:    3 PQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC-AVSYGCKGGWVNRAYDFIISNNGVTTDENYPYRAYQGTCNANYFPNSAY-ITGYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGPCG---FSLNHAITIIGYGRDS---YWIVRNSWGSSWGQGGYVRIRRDVSHSGGVCGI 203          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.157e-46
Identity = 97/218 (44.50%), Postives = 132/218 (60.55%), Query Frame = 1
Query:   22 PSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P S+DWRK+G  V+PVK+QGSCGSCW+FSTTGA+E   A+ TG ++SL+EQ+LVDC  +  ++GC GG    AFE++  N GI  E  YPY G D  C    ++  +  +    ++  +D   +  AV    P+S       +DF +Y  GIY+   C   P  ++HAVL VGYG ENG  YWIVKNSWG  WG++GYF I R  ++    C + A A
Sbjct:  117 PPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKA-IAFVKDVANITMNDEEAMVEAVALYNPVSFAF-EVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNM----CGLAACA 328          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.429e-46
Identity = 93/210 (44.29%), Postives = 133/210 (63.33%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSY---GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            P S+DWR++G VT VK QG+CGSCW+FS  GA+E    L TG L+SLS Q LVDC T  Y   GC+GG+M  AF+++I+N GID+E+ YPY  +DG C     + +  +   Y ++       L  AV  + P+SVG+  S S F LY +G+ Y+  C+ +   ++H VL+VGYG+ +G+DYW+VKNSWG  +G  GY  + R++    G
Sbjct:  116 PDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQY-DVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQN---VNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCG 321          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.091e-46
Identity = 101/221 (45.70%), Postives = 133/221 (60.18%), Query Frame = 1
Query:   22 PSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-----EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P S+DWRK+G  VTPVK+QGSCGSCW+FSTTGA+E   A+ TG L  L+EQ+LVDC  +  ++GC GG    AFE++  N GI  E  YPY G DG C    + +K ++    KDV        ++ +   A+  P+S     +A DF +Y  GIY+   C   P  ++HAVL VGYG E G  YWIVKNSWG +WG+ GYF I R  ++    C + A A
Sbjct:  117 PPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCKY--QPSKAIAF--VKDVANITLNDEEAMVEAVALHNPVSFAFEVTA-DFMMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNM----CGLAACA 328          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.063e-45
Identity = 97/216 (44.91%), Postives = 127/216 (58.80%), Query Frame = 1
Query:   19 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGI---YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            AP   DWRK+G VT VK+QG CGSCW+FS TG +EG   L  G L+SLSEQEL+DCD     C GG    A+  + N GG++TE DY Y G   TCN + +  KV   D  +     +      A + PISV +  +A   Q Y  GI   +   CS  P++IDHAVL+VGYG+ +   YW +KNSWG+ WG +GY+Y+ R +    G C +N MA
Sbjct:  249 APPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAI--NAFGMQFYRHGIAHPFRPLCS--PWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGS----GACGVNTMA 456          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.694e-45
Identity = 91/210 (43.33%), Postives = 132/210 (62.86%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSY---GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE--PSDSALLCAAVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            P S+DWR++G VT VK QGSCG+CW+FS  GA+E    L TG L+SLS Q LVDC T  Y   GC+GG+M  AF+++I+N GID+E+ YPY  ++G C    ++ +  +   Y ++     D+     A + P+SV +  S   F LY SG+ Y   C+ +   ++H VL+VGYG+ NG+DYW+VKNSWG ++G  GY  + R++    G
Sbjct:  116 PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKK-RAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQN---VNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCG 321          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.024e-44
Identity = 97/216 (44.91%), Postives = 124/216 (57.41%), Query Frame = 1
Query:   19 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGI---YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            AP   DWR +G VT VKDQG CGSCW+FS TG +EG   L  G L+SLSEQEL+DCD     C GG    A+  + N GG++TE DY Y G   +CN + E+ KV   D  +  +         A + PISV +  +A   Q Y  GI       CS  P+ IDHAVL+VGYG+ +   +W +KNSWGT WG  GY+Y+ R +    G C +N MA
Sbjct:  271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAI--NAFGMQFYRHGISRPLRPLCS--PWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMA 478          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.337e-44
Identity = 90/203 (44.33%), Postives = 120/203 (59.11%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYK-DVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYF 600
            +     P + DWR+ GIV+PVK+QG CGSCW+FSTTGA+E       G  ISLSEQ+LVDC  T  ++GC GG    AFE++  NGG+DTE  YPYTG DG C  + +   V   D     +   D       + +P+SV       +F+ Y  G++  + C N P  ++HAVL VGYG E+   YW++KNSWG  WG +GYF
Sbjct:  136 ITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAF-EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYF 337          
The following BLAST results are available for this feature:
BLAST of DR406141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CATH_MOUSE1.866e-4644.04Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CRUST_PANBO2.437e-4645.75Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
MDO1_PSEMR4.157e-4643.06Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CATH_PIG4.157e-4644.50Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATS_BOVIN5.429e-4644.29Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATH_BOVIN7.091e-4645.70Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATF_MOUSE2.063e-4544.91Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATS_CANFA2.694e-4543.33Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATF_HUMAN1.024e-4444.91Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
ALEUL_ARATH1.337e-4444.33Thiol protease aleurain-like OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248N22 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248N22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406141 ID=DR406141; Name=DR406141; organism=Citrus sinensis; type=EST; length=758bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACCGCCACCACCACCACCTCCA
TCTCCATC
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