DR406141

Overview
NameDR406141
Unique NameDR406141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR406141_ssr733 microsatellite DR406141_ssr733:733..744. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5704 contig Csv1_Contig5704:54..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.746e-44
Identity = 97/233 (41.63%), Postives = 138/233 (59.23%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD---------TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPYY-----IDHAVLIVGYGSE-------NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAM 654
            P   DWR++G VTPVKDQGSCGSCW+FSTTGA+EG + L TG L+SLSEQ+LVDCD         +   GC+GG M+ AFE+++ +GG+  E DY YTG DG+C   K +  V S+  +  V   +  +    V+  P++V +  +A+  Q Y SG+      + PY      +DH VL+VG+G           + YWI+KNSWG +WG  GY+ I R  ++    C +++M
Sbjct:  133 PEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKV-VASVSNFSVVTLDEDQIAANLVKNGPLAVAI--NAAWMQTYMSGV------SCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNV----CGVDSM 352          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.746e-44
Identity = 91/211 (43.13%), Postives = 129/211 (61.14%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT----SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGMVGSASDFQLYTSGIYNG-DCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            P ++DWR++G VT VK QGSCG+CW+FS  GA+EG   L TG LISLS Q LVDC       + GC GGYM  AF+++I+NGGI+ ++ YPY   D  C+    + +  +   Y  +   D   L    A + P+SVG+  S S F  Y SG+Y+   C+ +   ++H VL+VGYG+ +G+DYW+VKNSWG ++G  GY  + R+     G
Sbjct:  124 PDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHY-NSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGN---VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCG 330          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.746e-44
Identity = 93/220 (42.27%), Postives = 131/220 (59.55%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P   DWR+ G VTPV++QG CGSCW+F+  GAIEG     TG+L  LS Q L+DC  T  + GC  G    AFE+V+ N G++ E+ YPY G DG C   + E    +I  Y ++ P++  L  A     P+S  +  S   F+ Y  GI Y  +CS+  Y+++HAVL+VGYGSE    +G +YW++KNSWG  WG++GY  I +D +     C I ++A
Sbjct:  115 PDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPCRY-RSENASANITDYVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSS--YFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDHN---NHCGIASLA 328          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.082e-44
Identity = 90/217 (41.47%), Postives = 131/217 (60.37%), Query Frame = 1
Query:   19 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL-CAAVQQPISVGMVGSASDFQLYTSGIY-NGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            AP S+DWR +G+V PV++QG CGSCW+ ST  AIE  +A+ +G  + LS Q+LVDC T+  ++GC+GG+    FE+V +N G+++++DYPY+G +  C    +   VV + GYK V  S+++L        PIS  + G     + Y  GI+ +  C  D   + H V +VGYG ENG+ YWI+KN+WG  WG  GY  + RDT      C +  MA
Sbjct:  110 APESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDN-GLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFG--KPMKSYGGGIFDDSSCLGD--NLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDTD---HSCGVEKMA 318          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.637e-44
Identity = 98/217 (45.16%), Postives = 127/217 (58.53%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P  +DWR+ G VT VKDQG+CGSCW+FSTTG +EG         IS SEQ+LVDC     + GC GG M+ A+++ +   G++TES YPYT V+G C   K+   V  + GY  V       L      ++P +V  V   SDF +Y SGIY    CS  P  ++HAVL VGYG++ G DYWIVKNSWGT WG  GY  + R+       C I ++A
Sbjct:  109 PDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQY-LKQFGLETESSYPYTAVEGQCRYNKQ-LGVAKVTGYYTVHSGSEVELKNLVGARRPAAVA-VDVESDFMMYRSGIYQSQTCS--PLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRG---NMCGIASLA 317          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 1.132e-43
Identity = 89/204 (43.63%), Postives = 129/204 (63.24%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSY---GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            P S+DWR++G VT VK QGSCG+CW+FS  GA+E    L TG L+SLS Q LVDC T  Y   GC+GG+M  AF+++I+N GID+++ YPY  +D  C     + +  +   Y ++      +L  AV  + P+SVG+      F LY SG+ Y   C+ +   ++H VL+VGYG  NG++YW+VKNSWG ++G +GY  + R+
Sbjct:  116 PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY-DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQN---VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARN 315          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-43
Identity = 88/203 (43.35%), Postives = 117/203 (57.64%), Query Frame = 1
Query:   19 APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTS 621
            AP S+DWR   I+ P KDQG CGSCW+F TT  +EG      G L S SEQ+LVDCD +  GC+GG+   + +++  N G+  ESDYPY  V GTC   K+   V ++ G + V       L   + +  P++VGM  S   FQLY  G    D       ++H V  VGYGS +   YWI++NSWGTSWG  GYF + RD++
Sbjct:   93 APESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCDASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTC---KKVKNVATVTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARDSN 290          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.931e-43
Identity = 91/204 (44.61%), Postives = 128/204 (62.75%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYN-GDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRD 615
            P  +DWR +G VTPV++QG CGSC++F+T  A+E  +  +TG L+ LS Q +VDC  +  + GC GGYM  AF++  +  GI  ES YPY G +  C   ++   VV+ +G+ +++P D   L  AV +  P+ VG+ GS   F+ Y  G+Y+ G+C       DHAVL VGYG+  +  DYWIVKNSWGT WG DGY Y+ R+
Sbjct:  183 PDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQYA-SRYGIAMESRYPYVGTEQRCR-WQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP----DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARN 380          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.931e-43
Identity = 95/233 (40.77%), Postives = 139/233 (59.66%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD---------TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPYY----IDHAVLIVGYGSE-------NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAM 654
            P   DWR RG VTPVK+QGSCGSCWSFSTTGA+EG + L TG L+SLSEQ+LVDCD         +   GC+GG M+ AFE+ +  GG+  E DYPYTG D G+C + + +  V S+  +  V  ++  +    ++  P++V +  +A+  Q Y  G+      + PY     ++H VL+VGYGS          + YWI+KNSWG SWG +G++ I +  ++    C ++++
Sbjct:  133 PEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKI-VASVSNFSVVSINEDQIAANLIKNGPLAVAI--NAAYMQTYIGGV------SCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNI----CGVDSL 352          
BLAST of DR406141 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 2.522e-43
Identity = 96/208 (46.15%), Postives = 127/208 (61.06%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGED----YWIVKN-SWGTSWGIDGYFYITRD 615
            E P+S+DWR++G +TPVKDQG CGSCW+FS TGA+EG     TG LISL+EQ LVDC     + GC+GG+MD  F +V  NGG+D+E+ YPY G   TC    + +   +  G+ D+   +  L  A A   PISV    S   FQ Y  GIY  +   DP  +DHA+L+VGY  E  +     YW+VKN S G +WG+DGY  + +D
Sbjct:   56 EIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYNPKYS-AANDTGFVDIPSQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIY-FEPRCDPEGLDHAMLLVGYSYEGADSDNNKYWLVKNSSEGKNWGMDGYIKMAKD 261          
The following BLAST results are available for this feature:
BLAST of DR406141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CYSP_PEA1.746e-4441.63Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATS_MOUSE1.746e-4443.13Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATJ_MOUSE1.746e-4442.27Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATLL_PHACE5.082e-4441.47Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATLL_FASHE6.637e-4445.16Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATS_HUMAN1.132e-4343.63Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
ACP1_ENTHI1.478e-4343.35Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATL_BRUPA1.931e-4344.61Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
A494_ARATH1.931e-4340.77Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CATL6_HUMAN2.522e-4346.15Putative cathepsin L-like protein 6 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248N22 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248N22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406141 ID=DR406141; Name=DR406141; organism=Citrus sinensis; type=EST; length=758bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACCGCCACCACCACCACCTCCA
TCTCCATC
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