DR406120

Overview
NameDR406120
Unique NameDR406120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:980..1656. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406120 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 217.238 bits (552), Expect = 6.160e-56
Identity = 116/192 (60.42%), Postives = 135/192 (70.31%), Query Frame = 2
Query:  104 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADV 676
            DEL + A  I  PGKGILAADES  T+GKRL  I VEN E NRRA R+LLF T P   + +SGVILF ETLYQK   G PF ++LK+ G++ GIKVDKG V L G+  E TTQGLD LA RC +Y + G  FAKWR VLKIG N PS  +I ENAN LARYA ICQ   +VPIVEPE+L DG HD+++   V
Sbjct:   14 DELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVENTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKKKGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLDRAQKV 205          
BLAST of DR406120 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.057e-55
Identity = 110/188 (58.51%), Postives = 135/188 (71.81%), Query Frame = 2
Query:  107 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKC 667
            EL + A  I +PGKGILAADES G++GKRL+ I VEN E NRR  R++LF     +   + GVI F ETLYQ +  G PFV ++K+ G+  GIKVDKG V L GTNGET TQGLDGL++RC +Y + GA FAKWR V+KI    PS L I ENA  LARYA ICQ++G+VPIVEPEIL DG H++ +C
Sbjct:   15 ELHEIALRIVSPGKGILAADESIGSMGKRLNQIGVENNEENRRLFRQVLFTADDRIDNCIGGVIFFHETLYQNSDDGVPFVKMIKDKGITIGIKVDKGVVPLPGTNGETATQGLDGLSERCAQYKKDGADFAKWRCVMKISETTPSNLCITENAKVLARYASICQQHGIVPIVEPEILPDGDHNLKRC 202          
BLAST of DR406120 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.993e-55
Identity = 117/198 (59.09%), Postives = 139/198 (70.20%), Query Frame = 2
Query:   83 CFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADV 676
            C  GKY +ELIK A  + + G+GILA DES  T GKRL SI VEN E NRRA RELL   PG  QY+SG ILFEETLYQ TA+GK FVDV+KE  ++PGIKVDKG V    T   +   GLDG     + YY+AGARFAKWR+V+ I P+ PS + +   A GLARYA I Q  GLVPIVEPE+L+DG HDI++C +V
Sbjct:   25 CAPGKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTSAAE-YYKAGARFAKWRSVVSI-PHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEV 218          
BLAST of DR406120 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.895e-55
Identity = 115/185 (62.16%), Postives = 135/185 (72.97%), Query Frame = 2
Query:  104 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGL-ARYAIICQENGLVPIVEPEILVDGPH 652
            DEL   A  I TPGKGILAADESTG++ KRL+SI +EN E NRR  R+LLF     L +Y+SGVI+F ET YQKT  GKPF  +L+E G++PGIKVDKG V +AGT GE TTQGLD L  RC +Y + GA+FAKWR V KI    PS  A+ E A+ L +RYA ICQ+NGLVPIVEPEIL DG H
Sbjct:   14 DELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEH 198          
BLAST of DR406120 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.681e-45
Identity = 98/197 (49.75%), Postives = 120/197 (60.91%), Query Frame = 2
Query:   89 KGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADV 676
            K  Y  ELI+ A  +  PGKG+LAADESTG+  KR + I + N   +RR  R L+    G  QY+SGVIL +ET+YQK   G+ F   L+  GV+PGIK D G   L  G  GE  T GLDG  +R +KYY  G RF KWR V KI     S+  +  NA  LARYAI+ Q  GLVPIVEPE+++DG HDI  C  V
Sbjct:   19 KTPYEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRV 215          
BLAST of DR406120 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.201e-37
Identity = 80/178 (44.94%), Postives = 114/178 (64.04%), Query Frame = 2
Query:  143 GKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADV 676
            GKGILAADE+  T+G+R   + + N E NRR  RE+LF T G  +Y+ GVIL +ET  Q + +G P  ++LK+ G+  GIK+DKG ++      E  + GL+ L  RC+      A FAKWR++       PS+  INEN + LA+YAIICQ+NGLVPIVEPE+ ++G + + +  +V
Sbjct:   21 GKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEV 196          
The following BLAST results are available for this feature:
BLAST of DR406120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF_DROME6.160e-5660.42Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDCA_DANRE3.057e-5558.51Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALFC_CHLRE3.993e-5559.09Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_CAEEL8.895e-5562.16Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF_TRYBB1.681e-4549.75Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF_ENCCU2.201e-3744.94Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248M16 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248M16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406120 ID=DR406120; Name=DR406120; organism=Citrus sinensis; type=EST; length=677bp
CGGCCGGGGGCATAAAAATCGCTCTCTCTNNNTCTCCCTCTAACAAAACA
AATTTTCTATCTTCAAGTAGATCACCATGTCTTGCTTCAAGGGCAAATAC
GCCGATGAGCTCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAGGG
TATCCTTGCTGCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATCCA
GCATCAATGTTGAGAATGTTGAGGCAAACAGGCGTGCTCTCCGCGAGCTC
CTTTTCTGCACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTT
CGAGGAGACCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATG
TCTTGAAGGAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTACT
GTTGAGCTTGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGATGG
CCTCGCCCAGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGCCA
AATGGCGTGCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCC
ATCAATGAGAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAGGA
GAATGGCCTTGTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCCCC
ATGACATCAACAAGTGTGCTGATGTGA
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