DR406108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 171 VVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELQQTIAKHL 416 +VDF A+WCGPC+ IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: THIO_NEUCR (Thioredoxin OS=Neurospora crassa GN=trx PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 156 TKQLVVVDFTASWCGPCRFIAPFLAELAK--KLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIV 359 T Q VV DF A WCGPC+ IAP A+ AK +PN L F K++VD ++ VA + V AMPTF+F K GK V Sbjct: 20 TTQYVVADFYADWCGPCKAIAPMYAQFAKTFSIPNFLAFAKINVDSVQQVAQHYRVSAMPTFLFFKNGKQV 90
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: THIOM_RAT (Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 168 VVVDFTASWCGPCRFIAPFLAEL-AKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHL 416 VVVDF A WCGPC+ + P L ++ AK+ V+ KVD+D+ +A ++ V A+PT + +K G +VDK VG K E+ + K L Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKL 164
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: THIOM_MOUSE (Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 168 VVVDFTASWCGPCRFIAPFLAEL-AKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHL 416 VVVDF A WCGPC+ + P L ++ AK+ V+ KVD+D+ +A ++ V A+PT + +K G +VDK VG K E+ + K L Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKL 164
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: THIOM_HUMAN (Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 168 VVVDFTASWCGPCRFIAPFLAEL-AKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHL 416 VVVDF A WCGPC+ + P L ++ AK+ V+ KVD+D+ +A ++ V A+PT + +K G +VDK VG K E+ + K L Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKL 164
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: THIO_CHLCV (Thioredoxin OS=Chlamydophila caviae GN=trxA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13 Identity = 35/84 (41.67%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 165 LVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSK-KEELQQTIAKH 413 LV++DF A WCGPC+ + P L L ++ +VL KV++D+ + A + V ++PT + K+GK VD+VVG K K+ L + I +H Sbjct: 18 LVLIDFFAEWCGPCKMLTPVLESLEAEVSSVLIGKVNIDDHPAPAEQYGVSSIPTLILFKDGKEVDRVVGLKDKDSLIRLINQH 101
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: THIOM_BOVIN (Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 168 VVVDFTASWCGPCRFIAPFLAEL-AKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHL 416 VVVDF A WCGPC+ + P L ++ AK+ V+ KVD+D+ +A ++ V A+PT + +K G +VDK VG K E+ + K L Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDIDDHTDLALEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKL 164
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: TRXF_PEA (Thioredoxin F-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 168 VVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTI 404 VV+D WCGPC+ IAP EL++K +V+FLK+D + + KS+A + ++ +PTF LK+ KIV +V G+K ++L I Sbjct: 97 VVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAI 176
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: TRX2_SCHPO (Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe GN=trx2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.898e-12 Identity = 29/84 (34.52%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 162 QLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKH 413 ++ VVDF A WCGPC+++ PFL +L+++ F+ V+ D+ +A V A+PT + ++G+ +D++VG+ + L +AK+ Sbjct: 36 KVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAKY 119
BLAST of DR406108 vs. ExPASy Swiss-Prot
Match: THIO_LISMO (Thioredoxin OS=Listeria monocytogenes GN=trxA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.898e-12 Identity = 34/86 (39.53%), Postives = 56/86 (65.12%), Query Frame = 3 Query: 165 LVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSK-KEELQQTIAKHL 416 LV+ DF A+WCGPCR +AP L E+ ++ L +K+DVDE + V ++PT + K+G++V+ ++G + KEEL + I K++ Sbjct: 18 LVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV 103 The following BLAST results are available for this feature:
BLAST of DR406108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406108 ID=DR406108; Name=DR406108; organism=Citrus sinensis; type=EST; length=651bpback to top |