DR406026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_LOBMA (DNA-directed RNA polymerase subunit beta OS=Lobularia maritima GN=rpoB PE=3 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 4.113e-121 Identity = 213/223 (95.52%), Postives = 216/223 (96.86%), Query Frame = 2 Query: 2 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST KETCLKLPIGGRGRVIDVRWVQKKGGSSYNPE I VYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG LL+RHYRIAPFDERYEQEASRKLVFSELY+ASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 716 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPEKIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYQASKQTANPWVFEPEYPGKSRIFDGRTGDPF 938
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_ARATH (DNA-directed RNA polymerase subunit beta OS=Arabidopsis thaliana GN=rpoB PE=3 SV=3) HSP 1 Score: 433.721 bits (1114), Expect = 4.113e-121 Identity = 213/223 (95.52%), Postives = 216/223 (96.86%), Query Frame = 2 Query: 2 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST KETCLKLPIGGRGRVIDVRWVQKKGGSSYNPE I VYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG LL+RHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGK+RIFDGRTGDPF Sbjct: 716 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPEIIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKTRIFDGRTGDPF 938
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_ARAHI (DNA-directed RNA polymerase subunit beta OS=Arabis hirsuta GN=rpoB PE=3 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 4.113e-121 Identity = 213/223 (95.52%), Postives = 216/223 (96.86%), Query Frame = 2 Query: 2 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST KETCLKLPIGGRGRVIDVRWVQKKGG+SYNPE I VYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG LL+RHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 716 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWVQKKGGTSYNPEIIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 938
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_MORIN (DNA-directed RNA polymerase subunit beta OS=Morus indica GN=rpoB PE=3 SV=1) HSP 1 Score: 432.18 bits (1110), Expect = 1.197e-120 Identity = 212/221 (95.93%), Postives = 215/221 (97.29%), Query Frame = 2 Query: 8 LLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 LLRNLDKNGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQ+S KETCLKLPIGGRGRVIDVRW+QKKGGSSYNPETI VYI QKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLL+RHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 716 LLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQISISKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 936
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_VITVI (DNA-directed RNA polymerase subunit beta OS=Vitis vinifera GN=rpoB PE=3 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 1.563e-120 Identity = 211/221 (95.48%), Postives = 216/221 (97.74%), Query Frame = 2 Query: 8 LLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 LLRNLDKNGIV+LGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST KETCLKLPIGGRGRVIDVRW+QKKGGSSYNPETI VYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLL+RHYRIAPFDE+YEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 716 LLRNLDKNGIVILGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDEKYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 936
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_NASOF (DNA-directed RNA polymerase subunit beta OS=Nasturtium officinale GN=rpoB PE=3 SV=1) HSP 1 Score: 431.409 bits (1108), Expect = 2.041e-120 Identity = 212/223 (95.07%), Postives = 216/223 (96.86%), Query Frame = 2 Query: 2 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 GRLLR+LDKNGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST KETCLKLPIGGRGRVIDVRWVQKKGGSSYNPE I VYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG LL+RHYRIAPFDERYEQEASRKLVFSELY+ASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 716 GRLLRHLDKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPEIIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYKASKQTANPWVFEPEYPGKSRIFDGRTGDPF 938
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_PLAOC (DNA-directed RNA polymerase subunit beta OS=Platanus occidentalis GN=rpoB PE=3 SV=1) HSP 1 Score: 431.024 bits (1107), Expect = 2.666e-120 Identity = 209/221 (94.57%), Postives = 215/221 (97.29%), Query Frame = 2 Query: 8 LLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 LLRNLD+NGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST KETCLKLPIGGRGRVIDVRW+QKKGGSSYNPETICVYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDG P+DMVFNPLGVPSRMNVGQIFECSLGLAG LL+RHYRIAPFDERYEQEASRKLVFSELY+ASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 716 LLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETICVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPIDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSELYKASKQTANPWVFEPEYPGKSRIFDGRTGDPF 936
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_AETGR (DNA-directed RNA polymerase subunit beta OS=Aethionema grandiflora GN=rpoB PE=3 SV=1) HSP 1 Score: 430.254 bits (1105), Expect = 4.547e-120 Identity = 212/223 (95.07%), Postives = 214/223 (95.96%), Query Frame = 2 Query: 2 GRLLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 G LLRNLDKNGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST KETCLKLPIGGRGRVIDV WVQKKGGSSYNPE I VYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG LL+RHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 717 GHLLRNLDKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVGWVQKKGGSSYNPEKIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 939
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_NANDO (DNA-directed RNA polymerase subunit beta OS=Nandina domestica GN=rpoB PE=3 SV=1) HSP 1 Score: 429.483 bits (1103), Expect = 7.756e-120 Identity = 210/221 (95.02%), Postives = 214/221 (96.83%), Query Frame = 2 Query: 8 LLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 LLRNLD+NGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST KETCLKLPIGGRGRVIDVRW+ KKGGSSYNPETI VYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAGGLL+RHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 716 LLRNLDRNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTAKETCLKLPIGGRGRVIDVRWIHKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 936
BLAST of DR406026 vs. ExPASy Swiss-Prot
Match: RPOB_CHLSC (DNA-directed RNA polymerase subunit beta OS=Chloranthus spicatus GN=rpoB PE=3 SV=1) HSP 1 Score: 428.713 bits (1101), Expect = 1.323e-119 Identity = 209/221 (94.57%), Postives = 214/221 (96.83%), Query Frame = 2 Query: 8 LLRNLDKNGIVMLGSWVETGDILVGKLTPQAAKESSYAPEDRLLRAILDIQVSTPKETCLKLPIGGRGRVIDVRWVQKKGGSSYNPETICVYILQKREIKVGDKVAGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 670 LLRNLDKNGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRAIL IQVST +ETCLKLPIGGRGRVIDVRW+QKKGGSSYNPETI VYI QKREIKVGDKVAGRHGNKGI+SKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG LL+RHYRIAPFDERYEQEASRKLVF ELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF Sbjct: 716 LLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRAILGIQVSTTRETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFPELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPF 936 The following BLAST results are available for this feature:
BLAST of DR406026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406026 ID=DR406026; Name=DR406026; organism=Citrus sinensis; type=EST; length=671bpback to top |