DR406023

Overview
NameDR406023
Unique NameDR406023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5704 contig Csv1_Contig5704:54..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.593e-43
Identity = 95/233 (40.77%), Postives = 135/233 (57.94%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC---------DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDG-TCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPYY----IDHAVLIVGYGSE-------NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAM 654
            P   DWR  G VTPVK+QGSCGSCWSFS TGA+EG N L TG L+SLSEQ+LVDC         D+   GC+GG M+ AFE+ +  GG+  E DYPYTG DG TC + K +  V S+  +  +   +  +    V+  P++V +  +A   Q Y  G+      + PY     ++H VL+VGYG+          + YWI+KNSWG +WG +G++ I +  ++    C +++M
Sbjct:  136 PEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKI-VASVSNFSVISIDEEQIAANLVKNGPLAVAI--NAGYMQTYIGGV------SCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNI----CGVDSM 355          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43
Identity = 92/212 (43.40%), Postives = 124/212 (58.49%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            P  +DWR+ G VTPVK+QG C S W+FS TG++EG     T  LI LSEQ L+DC     ++GC GG+M YAF++V +NGG+ TE  YPY G    C     E    ++  +  +  S+ AL+ A  +  PISV +  S   FQ Y SGI Y   C     +++HAVL+VGYG E    +G  +W+VKNSWG  WG+ GY  + +D S   G
Sbjct:  115 PKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRY-HAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCG 323          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43
Identity = 92/232 (39.66%), Postives = 135/232 (58.19%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC---------DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ-PISVGMVGSASDFQLYTSGIYNGDCSNDPY----YIDHAVLIVGYGSE-------NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAM 654
            P   DWR  G V PVK+QGSCGSCWSFS +GA+EG + L TG L  LSEQ+ VDC         D+   GC+GG M  AF ++   GG+++E DYPYTG DG C   K +  V S+  +  V   ++ +    ++  P+++G+  +A+  Q Y  G+      + PY    ++DH VL+VGYG+          + YWI+KNSWG +WG +GY+ I R +++   KC +++M
Sbjct:  138 PDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKI-VASVQNFSVVSVDEAQISANLIKHGPLAIGI--NAAYMQTYIGGV------SCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVR-NKCGVDSM 359          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.125e-42
Identity = 89/213 (41.78%), Postives = 119/213 (55.87%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD----------TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGT-CNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSEN-----GEDYWIVKNSWGTSWGIDGYFYITR 612
            P++ DWR RG VTPVK+QG CGSCWSFSTTG +EG + +    L+SLSEQ LVDCD              GC+GG    A+ ++I NGGI TES YPYT   GT CN          I  +  + P +  ++   +     + +   A ++Q Y  G+++  C  +P  +DH +LIVGY ++N        YWIVKNSWG  WG  GY Y+ R
Sbjct:  119 PTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG-AKISNFTMI-PKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPC--NPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRR 327          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.469e-42
Identity = 84/216 (38.89%), Postives = 130/216 (60.19%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSA-LLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSE-NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            V     P S+DWR  G VT VK+QG CGSCW+F++   +E I  +  G+L+SLSEQ+++DC   SYGC GG+++ A+ ++I+N G+ + + YPY    GTC  T        I  Y  V+ ++   ++ A   QPI+  +  ++ +FQ Y  G++ G C      ++HA++I+GYG + +G+ +WIV+NSWG  WG  GY  + RD S  +G C I
Sbjct:  118 VDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC-AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCK-TNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAAL-DASGNFQHYKRGVFTGPCGT---RLNHAIVIIGYGQDSSGKKFWIVRNSWGAGWGEGGYIRLARDVSSSFGLCGI 327          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.918e-42
Identity = 88/212 (41.51%), Postives = 127/212 (59.91%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYN-GDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            P+  DWRK G VTPV++QG CGSCW+F+  GAIEG     TG+L  LS Q L+DC  +  + GC  G    AF +V+ N G++ E+ YPY G DG C    E     +I G+ ++ P++  L  A     P+S  +  S   F+ Y+ G+Y+  +CS+  Y ++HAVL+VGYG E    +G +YW++KNSWG  WGI+G+  I +D +   G
Sbjct:  115 PNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKDGPCRYHSENAS-ANITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSS--YVVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKDRNNHCG 323          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.272e-42
Identity = 86/202 (42.57%), Postives = 124/202 (61.39%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV--QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 615
            P S+DWR++G VT VK QGSCG+CW+FS  GA+E    L TG L+SLS Q LVDC     + GC+GG+M  AF+++I+N GID+E+ YPY   D  C     + +  +   Y ++      +L  AV  + P+ VG+  S   F LY SG+Y          ++H VL++GYG  NG++YW+VKNSWG+++G  GY  + R+
Sbjct:  116 PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQY-DSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQK--VNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARN 314          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.521e-42
Identity = 90/212 (42.45%), Postives = 125/212 (58.96%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIYN-GDCSNDPYYIDHAVLIVGYG----SENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYG 633
            P  +DWRK+G VTPV+ QG C +CW+F+ TGAIE      TG L  LS Q LVDC     + GC GG    AF++V++NGG+++E+ YPY G DG C    + +K   I G+  +  S+  L+ A A   PI+ G+  S   F+ Y  GIY+  +CS+D   + H VL+VGYG      +G  YW++KNSWG  WGI GY  + +D +   G
Sbjct:  116 PKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSK-AEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDT--VTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDKNNHCG 324          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.121e-41
Identity = 89/207 (43.00%), Postives = 115/207 (55.56%), Query Frame = 1
Query:    1 GVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTS 621
            G  S + P S DWR R  VT VK Q  CGSCW+FS    IE +  +     + LSEQ+LVDCD  + GC+GG M +AFE +I  GGI  E+ YPYTGVDG C   K  T+ V + G    +      L   + +   V +     D   Y SG+    CS D + ++H VL+VGYG EN   YW +KNSWG+ WG  G+F I RD +
Sbjct:  127 GDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC---KNTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAK-HCSVD-HGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDVN 328          
BLAST of DR406023 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41
Identity = 92/220 (41.82%), Postives = 124/220 (56.36%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P  +DWR  G VTPVK+QG C S W+FS TG++EG     TG L+ LSEQ L+DC     ++ C GG+M  AF++V +NGG+ TE  YPY G    C     E    ++  +  +   + AL+ A  +  PISV +  S   FQ Y SGI Y   C     +++HAVL+VGYG E    +G  YW+VKNSWG  WG+ GY  I +D +     C I  +A
Sbjct:  115 PKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRY-HAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDWN---NHCGIATLA 328          
The following BLAST results are available for this feature:
BLAST of DR406023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
RD19A_ARATH6.593e-4340.77Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
TEST2_RAT8.611e-4343.40Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CYSP1_MAIZE8.611e-4339.66Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI1.125e-4241.78Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
ANAN_ANACO1.469e-4238.89Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATJ_RAT1.918e-4241.51Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATS_SAIBB3.272e-4242.57Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATR_MOUSE9.521e-4242.45Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATV_GVXN2.121e-4143.00Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
TEST2_MOUSE2.770e-4141.82Testin-2 OS=Mus musculus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H19 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406023 ID=DR406023; Name=DR406023; organism=Citrus sinensis; type=EST; length=714bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCA
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