DR406011

Overview
NameDR406011
Unique NameDR406011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length387
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR406011 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.030e-15
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 3 
Query:    6 STGFLSEAILREHVPEGXXDTLALACGPPPMIQFAVQPNLEKMNYDTKDSLLVF 167
            S G++ E+ILREH+PEG  D LALACG P MI+ AV+ NLEKMNYDTK+SL++F
Sbjct:  845 SVGYIRESILREHIPEGSDDVLALACGAPSMIEEAVRLNLEKMNYDTKNSLIIF 898
The following BLAST results are available for this feature:
BLAST of DR406011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NIA_BETVE5.030e-1566.67Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406011 ID=DR406011; Name=DR406011; organism=Citrus sinensis; type=EST; length=387bp
GGGACAGTACGGGATTCCTTTCAGAAGCAATCCTCAGGGAGCACGTCCCA
GAAGGNNNNNNNGATACTCTTGCATTGGCGTGTGGGCCTCCTCCGATGAT
TCAATTTGCCGTGCAGCCGAATTTGGAGAAAATGAACTACGATACCAAGG
ATTCGTTGCTGGTGTTTTAAATTAAACGCTGGGGGCAAGCACAGACGACG
ATACCAGCCGAGGTTGTACATATTTAAACGTCGAAGTTTTCAGCAGCAGT
TAAGTACTGCGTCACTCTATAGAGTCTATAAATAAATTCTCCCCGATCAA
TAACAAAAAAAAAAAAAATAAAAAATTAAAAATAAAAAAAAAAAAAAAAA
AAAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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