DR405977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: TGDS_HUMAN (dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.052e-11 Identity = 53/187 (28.34%), Postives = 83/187 (44.39%), Query Frame = 3 Query: 162 AKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 722 AK +LVTGGAG+I SH ++ L+ Y ++ NLD A K E N+ N F + D+ D ++ LF K V+HFA V S + + N+ GT L+ + ++ S+ VYG E P + NPY +K E + + ++ +++ R N G H Sbjct: 17 AKRVLVTGGAGFIASHMIVSLV-EDYPNYMIINLDKLDYCASLKNLETISNK-QNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQS-YWEQYKFPVVITRSSNVYGPH 200
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 52/163 (31.90%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 168 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKE-LAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEV-MAAHGCKNLVFSSSATVYGWPKVVPCTE-EFPLEAMNPYGRTKLFIEEI 647 ++LVTG G++GSH L L G V +DN +N + ++ + + L ++G + + DL D L LF F V+H A V +++ P Y +N+ G + LLE+ AA+ +V++SS++VYG + VP +E + + + Y TK EEI Sbjct: 89 SVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVV--EGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEI 249
BLAST of DR405977 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 44/157 (28.03%), Postives = 78/157 (49.68%), Query Frame = 3 Query: 174 LVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFGAVIHFAGLEAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTE-EFPLEAMNPYGRTKLFIE 641 L+TG AG+IG H +L+ G+ V D + ++ + + + + + L D+AAL+ + +IH A V S++ P Y D NL+G+ +LE+ A K+L+ +S++++YG + +P E + E M Y TK +E Sbjct: 4 LITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPKHLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSME 160 The following BLAST results are available for this feature:
BLAST of DR405977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405977 ID=DR405977; Name=DR405977; organism=Citrus sinensis; type=EST; length=727bpback to top |