DR405941

Overview
NameDR405941
Unique NameDR405941
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6305 contig Csv1_Contig6305:1..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK3_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.187e-25
Identity = 82/239 (34.31%), Postives = 124/239 (51.88%), Query Frame = 1
Query:   94 EEVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKE--MDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNI------YGDPSFTFPYVPSHLHLM 765
            +++ R+     + +S++  ++FG     +    S  FL KELP+R+A    E+  LP  L  +P+V  V+ WY+ SF +L  + + +S  D +   +F Q++  ++ RHN+VVP MA G+ + K++   DP I       I  FLDRFY +RI  RMLI QH  L     NP  P H IG ID   +   V ++A E A+ +C + Y  AP+  +        D      YVPSHL  M
Sbjct:   14 KQIERYSRFSPSPLSIKQFLDFGRDNACEKT--SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYEN-KSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFI----STNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKH-IGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHM 244          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK2_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.187e-25
Identity = 80/224 (35.71%), Postives = 114/224 (50.89%), Query Frame = 1
Query:  133 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNIY------GDPSFTFPYVPSHLHLM 765
            +S++  ++FGS    +    S  FL +ELP+R+A    E+  LP  +   P+V  V+ WY+ S  D+  F D +   D R    FT  +  I+ RHN+VVP MA G+ + K       V      I  FLDRFY+SRI IRMLI QH  +     NP  P H IG ID   +  +V ++A + A+ +C + Y ++PD  I               YVPSHL+ M
Sbjct:   31 LSMKQFLDFGSSNACEKT--SFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLD-KDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSN--QNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKH-IGSIDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHM 248          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK3_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial OS=Mus musculus GN=Pdk3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.273e-25
Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 1
Query:   94 EEVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKE--MDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNI------YGDPSFTFPYVPSHLHLM 765
            +++ R+     + +S++  ++FG     +    S  FL KELP+R+A    E+  LP  L  +P+V  V+ WY+ SF +L  + + +S  D R   +F  ++  I+ RHN+VVP MA G+ + K++   DP I       I  FLDRFY +RI  RMLI QH  L     NP  P H IG ID   +   V ++A E A+ +C + Y  AP+  +        +      YVPSHL  M
Sbjct:   14 KQIERYSRFSPSPLSIKQFLDFGRDNACEKT--SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYEN-KSPEDPRVLDNFLNVLINIRNRHNDVVPTMAQGVIEYKEKFGFDPFI----SSNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPAHPKH-IGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPNKPIQVVYVPSHLFHM 244          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK1_RAT ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Rattus norvegicus GN=Pdk1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.211e-24
Identity = 79/225 (35.11%), Postives = 119/225 (52.89%), Query Frame = 1
Query:  133 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNIY-------GDPSFTFPYVPSHLHLM 765
            +S++  ++FGS    +    S  FL +ELP+R+A    E+  LP  L   P+V  V+ WY+ S ++L  F D +S  D +   +FT  +  I+ RHN+V+P MA G+ + K+      V      +  FLDRFYMSRI IRML+ QH  L     +P+   H IG I+     V+V ++  E+AR +C   Y ++P+  +        G P     YVPSHL+ M
Sbjct:   57 LSMKQFLDFGSVNACEKT--SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKD-KSAEDAKTIYEFTDTVIRIRNRHNDVIPTMAQGVTEYKESFGVDPVTS--QNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGSPSHRKH-IGSINPNCDVVEVIKDGYENARRLCDLYYVNSPELELEELNAKSPGQP-IQVVYVPSHLYHM 274          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK4_RHIFE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Rhinolophus ferrumequinum GN=PDK4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.582e-24
Identity = 77/235 (32.77%), Postives = 124/235 (52.77%), Query Frame = 1
Query:   97 EVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPP--PHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNIY-------GDPSFTFPYVPSHLHLM 765
            EV  +     + +S++ +++FGS+   +    S+ FL +ELP+R+A    E++ LP  L    +V  V+ WY+ S  +L  F + RS  D++   DF   +  ++ RH+NVVP MA G+ + K       V      +  FLDRFYM+RI  RML+ QH+ + + +    P  IG ID   +   V ++A E +R +C + Y ++P+  +        G+P     YVPSHLH M
Sbjct:   23 EVEHFSRYSPSPLSMKQLLDFGSENACERT--SSAFLRQELPVRLANILKEIDILPDRLVNTSSVQLVKSWYIQSLMELVEFHE-RSPDDQKVLSDFVDTLITVRNRHHNVVPTMAQGIIEYKDSCTVDPVTN--QNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSHIGSIDPNCNVAAVVQDAFECSRMLCDQYYLTSPELKLTQVNGKFPGEP-IHIVYVPSHLHHM 251          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK1_MOUSE ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Mus musculus GN=Pdk1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.582e-24
Identity = 79/224 (35.27%), Postives = 119/224 (53.12%), Query Frame = 1
Query:  133 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELH----NPNPPPHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNI----YGDPSFTFP--YVPSHLHLM 765
            +S++  ++FGS    +    S  FL +ELP+R+A    E+  LP  L   P+V  V+ WY+ S ++L  F D +S  D +   +FT  +  I+ RHN+V+P MA G+ + K+      V      +  FLDRFYMSRI IRML+ QH  L     +P+   H IG I+     V+V ++  E+AR +C   Y ++P+  +       P  T    YVPSHL+ M
Sbjct:   57 LSMKQFLDFGSVNACEKT--SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKD-KSAEDAKTIYEFTDTVIRIRNRHNDVIPTMAQGVTEYKESFGVDPVTS--QNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGSPSHRKH-IGSINPNCDVVEVIKDGYENARRLCDLYYVNSPELELEELNAKSPGQTIQVVYVPSHLYHM 274          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK4_SPETR ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Spermophilus tridecemlineatus GN=PDK4 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.698e-24
Identity = 73/222 (32.88%), Postives = 118/222 (53.15%), Query Frame = 1
Query:  133 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPP--PHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNI------YGDPSFTFPYVPSHLHLM 765
            +S++ +++FGS    +    S  FL +ELP+R+A    E++ LP  L+   +V  V+ WY+ S  +L  F + +S  D++   DF   +  ++ RH+NVVP MA G+ + K       V      +  FLDRFYM+RI  RML+ QH+ + + +    P  IG ID K   V V ++A E ++ +C + Y ++P+  +      +        YVPSHLH M
Sbjct:   35 LSMKQLLDFGSDNACERTSFS--FLRQELPVRLANILKEIDVLPDRLTNTSSVQLVKSWYIQSLMELVEFHE-KSPEDQKNLSDFVDTLIKVRNRHHNVVPTMAQGILEYKDTCTVDPVTN--QSLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSHIGSIDPKCDVVAVIQDAFESSKMLCDQYYLTSPELKLTQVNGKFPGQPIHIVYVPSHLHHM 251          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK1_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Homo sapiens GN=PDK1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.698e-24
Identity = 79/227 (34.80%), Postives = 120/227 (52.86%), Query Frame = 1
Query:  133 VSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELH------NPNPPPHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNIY-------GDPSFTFPYVPSHLHLM 765
            +S++  ++FGS    +    S  FL +ELP+R+A    E+  LP  L   P+V  V+ WY+ S ++L  F D +S  D +   DFT  +  I+ RHN+V+P MA G+ + K+      V      +  FLDRFYMSRI IRML+ QH  L       +P+   H IG I+   + ++V ++  E+AR +C   Y ++P+  +        G P     YVPSHL+ M
Sbjct:   57 LSMKQFLDFGSVNACEKT--SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKD-KSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTS--QNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKH-IGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQP-IQVVYVPSHLYHM 276          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDK_ASCSU ([Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Ascaris suum PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.637e-21
Identity = 82/252 (32.54%), Postives = 123/252 (48.81%), Query Frame = 1
Query:   58 KKLSETFSKTLIEEVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSF------PDIRSTSDERDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELHN---PNPPPHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNIYGDPS------FTFPYVPSHL-HLM 765
            ++L   F+  +  ++  +   + + ++++  ++FG   T K+  +   FL  EL +R+A    E+  LP  L + P+   V +WY +SF DL  F      PDI S      F   ++ I  RH+ VV  MA GL +L++     I  E    I  FLDRFY++RI IRML  QH+ +     P  P H IG ID       V  +A E+AR +C R Y +AP   +    S       +   VPSHL H+M
Sbjct:    5 RRLLGPFTSAIARKLEHYSQFQPSSLTIQQYLDFGQTGTMKSSFL---FLKNELLVRLANIMQEISLLPPTLLKMPSRRLVSNWYCESFEDLLQFEHAQVEPDIMS-----KFNDQLQTILKRHSRVVETMAEGLIELRESEGVDIASE--RGIQYFLDRFYINRISIRMLQNQHLVVFGVVLPESPRH-IGCIDPGCDVESVVHDAYENARFLCERYYLTAPGMKLEMHNSVNPGMPISIVAVPSHLYHIM 245          
BLAST of DR405941 vs. ExPASy Swiss-Prot
Match: PDHK2_CAEEL (Probable [pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Caenorhabditis elegans GN=pdhk-2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.386e-20
Identity = 79/248 (31.85%), Postives = 122/248 (49.19%), Query Frame = 1
Query:   55 AKKLSETFSKTLIEEVGRWGCMKQTGVSLRYMMEFGSKPTDKNLLISAQFLHKELPIRIARRAIELETLPYGLSEKPAVLKVRDWYLDSFRDLRSFPDIRSTSDE-RDFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLDEIHQFLDRFYMSRIGIRMLIGQHVELHN---PNPPPHCIGYIDTKMSPVQVARNASEHARCVCLREYGSAPDFNI-------YGDPSFTFPYVPSHLHLM 765
            ++KL   F  +L +++  +   + + ++++  ++FG   T  N   S  FL  EL +R+A    E   LP  L + P+   V +WY +SF DL  F    S+ ++   F   +  +  RH +VV  MA GL +L++     I  E    I  FLDRFY++RI IRML  QH+ +     P  P H +G ID       V  +A E+AR +C R Y ++P   +        G P  +   VPSHL+ M
Sbjct:    4 SRKLLGPFVGSLAKKLDYYSQFQPSSLTIQQYLDFGRIGTSAN---SYTFLKNELLVRLANIMQEFTLLPPKLLQMPSSKMVSNWYAESFEDLLLFEASDSSPEQVARFNDQLTVVLKRHAHVVETMAEGLIELRESDGVDIASE--KGIQYFLDRFYINRISIRMLQNQHLVVFGNVLPESPRH-VGCIDPACDVESVVYDAFENARFLCDRYYLTSPSMKLEMHNAVEKGKP-ISIVAVPSHLYHM 244          
The following BLAST results are available for this feature:
BLAST of DR405941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PDK3_HUMAN3.187e-2534.31[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK2_HUMAN3.187e-2535.71[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK3_MOUSE9.273e-2534.31[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK1_RAT1.211e-2435.11[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK4_RHIFE1.582e-2432.77[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK1_MOUSE1.582e-2435.27[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK4_SPETR2.698e-2432.88[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK1_HUMAN2.698e-2434.80[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
PDK_ASCSU1.637e-2132.54[Pyruvate dehydrogenase [lipoamide]] kinase, mitoc... [more]
PDHK2_CAEEL1.386e-2031.85Probable [pyruvate dehydrogenase [lipoamide]] kina... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248E01 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405941 ID=DR405941; Name=DR405941; organism=Citrus sinensis; type=EST; length=768bp
GGGGAGGAATTGGATTTTTTTGTGAGAAAGCAGAAGCCAGAAGCAGCAAT
GGCTGCTAAGAAATTGTCGGAGACGTTTTCGAAGACCTTGATCGAGGAGG
TTGGGCGATGGGGATGCATGAAACAGACAGGTGTGAGCTTGAGGTACATG
ATGGAGTTTGGCTCAAAACCTACAGACAAGAATTTGCTAATTTCTGCTCA
GTTTCTTCACAAAGAGCTTCCAATTAGAATCGCCAGACGAGCAATTGAGC
TCGAGACACTTCCTTACGGTTTATCCGAGAAGCCTGCCGTTTTGAAGGTT
CGAGACTGGTATTTGGACTCATTTCGTGATTTGAGGTCGTTTCCTGACAT
CAGAAGTACGAGTGATGAGAGGGATTTTACGCAAATGATTAAGGCGATTA
AGGTGAGGCATAATAATGTGGTGCCCATGATGGCGTTGGGGCTGCAACAA
TTGAAGAAAGAGATGGATCCCAAGATTGTTTACGAGGATCTTGATGAGAT
TCATCAGTTTCTGGATCGGTTTTACATGTCTAGGATCGGAATTCGTATGC
TTATTGGGCAGCATGTAGAATTGCACAATCCCAACCCTCCACCTCATTGT
ATTGGCTACATAGACACAAAAATGTCTCCAGTGCAGGTTGCTAGGAATGC
TAGTGAGCATGCACGTTGTGTTTGTCTGCGGGAGTATGGCAGTGCACCCG
ATTTTAATATCTACGGTGATCCCAGTTTTACATTCCCTTACGTCCCTTCA
CACTTGCATCTCATGGGT
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