DR405910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_STAA1 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=ndk PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.732e-41 Identity = 82/149 (55.03%), Postives = 105/149 (70.47%), Query Frame = 2 Query: 77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 520 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE H + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS+ESA++EI LWF + I ++ S W+YE Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_PROM5 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=ndk PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.732e-41 Identity = 85/148 (57.43%), Postives = 104/148 (70.27%), Query Frame = 2 Query: 80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 520 E+TF+ IKPDGVQRG + EII RFEKKGF L GLK + + A+ H +PFF L+ +I+SGPVVAMIWEGEGV+ + R IIGAT P ++ PGTIRGDLAI GRNIIHGSD E+A+ EI LWF I +W++S W E Sbjct: 4 ERTFLAIKPDGVQRGYIAEIIGRFEKKGFKLVGLKQLIPSKQLAQDHYGVHRERPFFKDLVNFISSGPVVAMIWEGEGVILSARKIIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFDQHEICDWETSDSEWRVE 151
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_PROM0 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ndk PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.732e-41 Identity = 82/145 (56.55%), Postives = 105/145 (72.41%), Query Frame = 2 Query: 80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 511 E+TFI IKPDGVQRG V EII RFEKKGF L GLK + + A+ H +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IG+T P ++ PGTIRGDLAI GRNIIHGSD ++A+ EI LWF + + W++S W Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGSTKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWETSDLKW 148
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.140e-40 Identity = 84/145 (57.93%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 511 E+TF+ IKPDGVQRG V +II RFEKKGF L GLK + + A+ H +PFF L+E+I+SGPVVAMIWEGEGV+ + R +IGAT P ++ PGTIRGDLAI GRNIIHGSD E+A+ EI LWF I +W++S W Sbjct: 4 ERTFLAIKPDGVQRGYVSDIIGRFEKKGFKLVGLKQLIPTKQLAQDHYGVHRERPFFKDLVEFISSGPVVAMIWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFNQDEICDWETSDSEW 148
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.140e-40 Identity = 83/148 (56.08%), Postives = 102/148 (68.92%), Query Frame = 2 Query: 80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 520 E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L LK + R AE+H +PFF L+++ITSGPV+AMIWEGEGV+ R +IG+T P + PGTIRGDLAI GRN+IHGSD E+A EI LWF + +W S W E Sbjct: 4 ERTFLAIKPDGVQRGLVGEILSRFERKGFKLIALKQLIPSRALAEQHYGVHRERPFFKGLVDFITSGPVIAMIWEGEGVILGARKLIGSTKPLDADPGTIRGDLAIDIGRNVIHGSDGPETASFEIGLWFESSELSDWNPSDQLWRVE 151
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_LISMO (Nucleoside diphosphate kinase OS=Listeria monocytogenes GN=ndk PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.489e-40 Identity = 81/147 (55.10%), Postives = 106/147 (72.11%), Query Frame = 2 Query: 77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 514 MEQT++M+KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKH + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS ESAQ+EI L+F PD +++Q ++ WI Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI 147
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_STAAW (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MW2) GN=ndk PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.945e-40 Identity = 81/149 (54.36%), Postives = 105/149 (70.47%), Query Frame = 2 Query: 77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 520 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE H + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS++SA++EI LWF + I ++ S W+YE Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_STAAS (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MSSA476) GN=ndk PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.945e-40 Identity = 81/149 (54.36%), Postives = 105/149 (70.47%), Query Frame = 2 Query: 77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 520 ME+TF+MIKPD VQR L+GE+I R E+KG L G KLM V AE H + KPF+ LI +ITS PV AM+ EGE V R IIG+TNP++++PG+IRGDL + GRNIIHGSDS++SA++EI LWF + I ++ S W+YE Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_EXISA (Nucleoside diphosphate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=ndk PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.945e-40 Identity = 75/133 (56.39%), Postives = 100/133 (75.19%), Query Frame = 2 Query: 77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 475 ME+TF+M+KPDGV+RGL+GEII RFE KG++L L+++T AE H + KPFFG L+E++TSGPVVAM WEGE +V R +IG T P + PGTIRGD A +N+IHGSDSV+SA++E++LWF + Sbjct: 1 MEKTFLMVKPDGVKRGLIGEIISRFENKGYTLNRLEMVTPSVEVAEAHYAEHKEKPFFGELVEFLTSGPVVAMEWEGEDIVAVSRLMIGKTKPVDAQPGTIRGDFASTMSQNVIHGSDSVDSAERELSLWFAE 133
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_EXIS2 (Nucleoside diphosphate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=ndk PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.541e-40 Identity = 76/137 (55.47%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN 487 MEQTF+M+KPDGV+RGL+GEII R E+KGF ++ +K+M V A+ H + + KPFFG L+ ++TSGPVVA+ EGE VV R +IG T P ++ PGTIRGD A N+IHGSDSVESA++E+ LWF P+N Sbjct: 1 MEQTFLMVKPDGVERGLIGEIIARIERKGFVIREMKMMQVTEELAQAHYAEHAEKPFFGELVTFLTSGPVVALRVEGEDVVTVSRMMIGKTKPTEALPGTIRGDFANTMSENVIHGSDSVESAERELGLWFQGQPLN 137 The following BLAST results are available for this feature:
BLAST of DR405910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405910 ID=DR405910; Name=DR405910; organism=Citrus sinensis; type=EST; length=645bpback to top |