DR405910

Overview
NameDR405910
Unique NameDR405910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_ASPFU (Nucleoside diphosphate kinase OS=Aspergillus fumigatus GN=ndk1 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.344e-49
Identity = 94/148 (63.51%), Postives = 114/148 (77.03%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 520
            EQTFI IKPDGVQRGL+G II RFE +GF L  +KL++  +   E+H  DLS KPFF  L+ Y+ SGP+ AM+WEG  VVKTGRTI+GATNP  SAPGTIRGD AI  GRN+ HGSDSVE+A+KEIALWF P+  I+W+S+   W+YE
Sbjct:    4 EQTFIAIKPDGVQRGLIGPIISRFENRGFKLVAMKLVSPPQSQLEQHYADLSDKPFFKGLVSYMLSGPICAMVWEGRDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVENAKKEIALWFKPEELISWKSATFDWVYE 151          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_ACAM1 (Nucleoside diphosphate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=ndk PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.344e-49
Identity = 95/149 (63.76%), Postives = 114/149 (76.51%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 520
            ME+TF+ +KPDGVQRGLVGEII R+E KGF+L GLKLM V R  AE+H  +   KPFF  L+++ITSGPVVAM+WEG+GVV   R IIGATNP  S PGTIRGD  I  GRNIIHGSD+VE+AQ+EI+LWF    + +W  +L  WIYE
Sbjct:    1 MERTFLAVKPDGVQRGLVGEIISRYEAKGFTLVGLKLMVVSRELAEQHYGEHKEKPFFSGLVDFITSGPVVAMVWEGKGVVAAARKIIGATNPLGSEPGTIRGDFGIDIGRNIIHGSDAVETAQREISLWFKSEELADWSPTLTSWIYE 149          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_ANAVT (Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndk PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.755e-49
Identity = 93/149 (62.42%), Postives = 115/149 (77.18%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 520
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+H      +PFF SL+E+ITSGPVVAM+WEG+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+AQKE++LWF D   +NWQ  L PW++E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_ANASP (Nucleoside diphosphate kinase OS=Anabaena sp. (strain PCC 7120) GN=ndk PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.755e-49
Identity = 93/149 (62.42%), Postives = 115/149 (77.18%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 520
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+H      +PFF SL+E+ITSGPVVAM+WEG+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+AQKE++LWF D   +NWQ  L PW++E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_CYAA5 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain ATCC 51142) GN=ndk PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.292e-49
Identity = 90/149 (60.40%), Postives = 118/149 (79.19%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 520
            ME+TFIMIKPDGVQRGLVGE+I RFE KGF+L GLKLM+V +  AE+H +    +PFFGSL+E+I S PVVAM+WEG+GVV + R +IGATNP  + PGTIRGD  +  GRN+IHGSD++E+AQ+EI+LWF +  + +W+ +   W+YE
Sbjct:    1 MERTFIMIKPDGVQRGLVGEVIGRFEAKGFTLVGLKLMSVSKELAEEHYDVHKERPFFGSLVEFICSSPVVAMVWEGDGVVASARKLIGATNPLSAEPGTIRGDFGVSVGRNLIHGSDAIETAQREISLWFNEKELSSWEPTAKTWLYE 149          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.292e-49
Identity = 92/149 (61.74%), Postives = 115/149 (77.18%), Query Frame = 2
Query:   74 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 517
            E E+TFI IKPDGVQRGL+ EI+ RFE+KGFSL  +K++   RPFA+KH  DL  KPF+  L+ Y +SGPVVAM+WEGEGV+K GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI LWF P+  +N+  +   WIY
Sbjct:    2 EFERTFIAIKPDGVQRGLISEIVARFERKGFSLVAIKVVIPSRPFAQKHYADLKDKPFYVGLVAYWSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVNGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 150          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.107e-49
Identity = 93/153 (60.78%), Postives = 116/153 (75.82%), Query Frame = 2
Query:   65 NLKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 520
            +L++++Q +IM+KPDGVQRGLVGEII RFEKKGF L GLKL    +  AE+H + L+ K FF  LIEYITSGPVV+M WEG GVV + R +IGAT+P Q+ PGTIRGD A+ TGRNIIHGSDS E+ ++EIALWF +G +  W     PW+ E
Sbjct:   78 SLEQVDQAYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPVVSMAWEGVGVVPSARKLIGATDPLQAEPGTIRGDFAVQTGRNIIHGSDSPENGEREIALWFKEGELCEWTPVQEPWLRE 230          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_EMENI (Nucleoside diphosphate kinase OS=Emericella nidulans GN=swoH PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.138e-48
Identity = 95/148 (64.19%), Postives = 111/148 (75.00%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 520
            EQTFI IKPDGVQRGLVG II RFE +GF L  +KL +  R   E+H  DL  KPFF  L+ Y+ SGP+VAM+WEG+ VVKTGRTI+GATNP  SAPGTIRGD AI  GRN+ HGSDSVESA+KEI LWF P+   N++ +   WIYE
Sbjct:    4 EQTFIAIKPDGVQRGLVGPIISRFENRGFKLAAMKLTSPSRSLLEQHYSDLKEKPFFPGLVTYMLSGPIVAMVWEGKDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVESAKKEIGLWFTPEEIQNYKLNAFGWIYE 151          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_TRIEI (Nucleoside diphosphate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=ndk PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.486e-48
Identity = 94/149 (63.09%), Postives = 115/149 (77.18%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 520
            ME+TFI IKPDGVQRGLVG+II RFE KGF+L GLK+MTV +  AEKH +    +PFF SLIE+I SGP+VAM+WEGEGVV + R IIGATNP  + PGTIRGD  I  GRN+IHGSD++E+AQ EI LWF +   ++W+ +L  WI E
Sbjct:    1 MERTFIAIKPDGVQRGLVGQIISRFETKGFTLVGLKIMTVTKELAEKHYDVHKERPFFSSLIEFIKSGPLVAMVWEGEGVVASARKIIGATNPLTAEPGTIRGDYGISLGRNLIHGSDAIETAQTEINLWFKEEELVSWKPTLTSWIVE 149          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.486e-48
Identity = 89/149 (59.73%), Postives = 115/149 (77.18%), Query Frame = 2
Query:   74 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 517
            E E+TFI IKPDGVQRGL+ EI+ RFE+KGF L  +K++   + FA+KH  DLS +PFF  L ++++SGPVVAM+WEGEGV+K GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI LWF P+  +N+  +   WIY
Sbjct:   84 EFERTFIAIKPDGVQRGLISEIVARFERKGFKLVAIKVVIPSKDFAQKHYHDLSERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 232          
The following BLAST results are available for this feature:
BLAST of DR405910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_ASPFU1.344e-4963.51Nucleoside diphosphate kinase OS=Aspergillus fumig... [more]
NDK_ACAM11.344e-4963.76Nucleoside diphosphate kinase OS=Acaryochloris mar... [more]
NDK_ANAVT1.755e-4962.42Nucleoside diphosphate kinase OS=Anabaena variabil... [more]
NDK_ANASP1.755e-4962.42Nucleoside diphosphate kinase OS=Anabaena sp. (str... [more]
NDK_CYAA52.292e-4960.40Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]
NDK3_SPIOL2.292e-4961.74Nucleoside diphosphate kinase 3 OS=Spinacia olerac... [more]
NDK2_PEA5.107e-4960.78Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDK_EMENI1.138e-4864.19Nucleoside diphosphate kinase OS=Emericella nidula... [more]
NDK_TRIEI1.486e-4863.09Nucleoside diphosphate kinase OS=Trichodesmium ery... [more]
NDK4_SPIOL1.486e-4859.73Nucleoside diphosphate kinase 4, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248C13 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248C13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405910 ID=DR405910; Name=DR405910; organism=Citrus sinensis; type=EST; length=645bp
GGGGATTCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAACA
AGTTGGTTTCTCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATC
AAGCCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATT
TGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACC
GCCCTTTTGCTGAGAAGCACTGTGAGGATTTGTCATCGAAGCCTTTCTTT
GGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTG
GGAGGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCA
ACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGTG
ACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCCAGAA
AGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCC
TTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATT
GTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTAT
GGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATT
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