DR405904

Overview
NameDR405904
Unique NameDR405904
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.685e-33
Identity = 74/172 (43.02%), Postives = 100/172 (58.14%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFY-TSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWD 718
            ++F + Y   +G  ++     G+ V L +++ SG GF S   Y  G F   IK+PS +T G+  AFY TS G      HDE+DFEFLGN  GKP   QTN + NG     REER+ LWF+PTK +H Y +LW    I+FYVD +PIR  V     G  +PSKPM +  ++W+
Sbjct:   33 VTFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGG----GHDEIDFEFLGNNNGKPVTLQTNLFLNGEG--NREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIR--VYKNENGVSYPSKPMQVEASLWN 196          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33
Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G +++L L++++G+GF S   Y  G FS  IK+    +AG   AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK++HRYSILW    I+F+VDEVPIR    SK +G  FP  +PM +Y ++W+A
Sbjct:   52 GSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNA 198          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.209e-33
Identity = 70/152 (46.05%), Postives = 99/152 (65.13%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G  ++L+L++++G+GF S   Y  G FS  IKLP+  TAG+  AFY S+ +     HDE+DFEFLGN  G+P   QTN +  G     RE+R  LWFDP+K +H YSILW    I+F+VD +PIR    +K +G  FP ++PM LY+++W+A
Sbjct:   54 GSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTN---NEHDEIDFEFLGNRTGQPAILQTNVFTGGKG--NREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNA 200          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G  ++L+L++++G+GF S   Y  G FS  IKLP+  TAG+  AFY S+ +     HDE+DFEFLGN  G+P   QTN +  G     RE+R  LWFDP+K +H YS+LW    I+F+VD +PIR    +K +G  FP ++PM LY+++W+A
Sbjct:   53 GSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTN---NEHDEIDFEFLGNRTGQPVILQTNVFTGGKG--NREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNA 199          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 70/172 (40.70%), Postives = 108/172 (62.79%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            +F E +   + + ++ +  DGK ++L+L++ +G GF S + Y  G  S  IKL    +AG   AFY ++        DELDFEFLGN +G+P+  QTN + +G     RE+R  LWFDP+  +H Y+ILW+  +I+FYVD+VPIRE   ++A    +P S+PM +Y+T+W+A
Sbjct:   34 TFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTA--TVRDELDFEFLGNRSGQPYSVQTNIFAHGKG--DREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEA 201          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G  V L+L++++G+GF S   Y  G FS  IK+ +  +AG   AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G  A  RE+R  LWFDP+K +H YS+LW    I+F+VD+VPIR    SK +G  FP ++PM +Y+++W+A
Sbjct:   51 GSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQN---SEHDEIDFEFLGNRTGQPYILQTNVFTGG--AGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNA 197          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.388e-32
Identity = 71/174 (40.80%), Postives = 106/174 (60.92%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRS-KAMGGDF--PSKPMSLYTTIWDA 721
            SF++ ++ ++ + +   S DG+   L L+  +G GF +  +Y  G+FS  +KL    +AG+  A+Y  + +      DE+DFEFLGN  G+P+  QTN Y NG+    RE R+ LWFDPTK +H YSILW ++ ++F+VD VPIR    S K    DF    KPM L+++IW+A
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGT--GNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNA 195          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.388e-32
Identity = 70/152 (46.05%), Postives = 97/152 (63.82%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G    L+L+R SG+GF S K Y  G FS  ++L    +AG+  AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK +H YS+LW +  I+ +VD+VPIR    SK +G  FP ++PM +Y+++WDA
Sbjct:   52 GTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--NREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDA 198          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32
Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            SF+E +   +G+        GK + L L+R SGSGF S K Y  G     +KL + ++AG   A+Y S+      THDE+DFEFLGN  GKP+   TN +  G     RE+++ LWFDPTK FH YS++W   +IIF VD VPIR    ++ +G  FP ++PM +Y+++W+A
Sbjct:   26 SFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEG---PTHDEIDFEFLGNETGKPYVLHTNVFAQGKG--NREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNA 192          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32
Identity = 69/152 (45.39%), Postives = 95/152 (62.50%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G  ++L L++++G+GF S   Y  G FS  IKL    +AG   AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPT Q+HRYS+LW    I+FYVD+ PIR    S  +G  FP ++PM +Y ++W+A
Sbjct:   50 GSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNA 196          
The following BLAST results are available for this feature:
BLAST of DR405904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH3_ARATH3.685e-3343.02Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN6.285e-3346.71Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH8.209e-3346.05Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_BRAOB1.829e-3245.39Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH6_ARATH1.829e-3240.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH1.829e-3245.39Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH2.388e-3240.80Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC2.388e-3246.05Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH5.321e-3242.44Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN9.076e-3245.39Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248C05 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405904 ID=DR405904; Name=DR405904; organism=Citrus sinensis; type=EST; length=721bp
GGGGAACACACACCGTAACAAATTTTATTTATAGAAACCAAAAATAATAA
TGGATTGGTTTCTTTGCTCTCAATCAAAAAAATCATCAGCACCCTTCACT
CTAATTCTAATTCTGTTGTGTTGCTGCTCATCACCATCACTTGTGTTCAC
ATTCACAAACGCAGCGTCGTCGTTGTCGTCATCATCTGCTTTCAACCTCG
CCACCATCTCTTTCGATGAAGGCTACTCTCATCTTTTCGGCGACGGCAAT
CTCATTCGCTCCCCCGACGGCAAGAACGTTCGTCTCCTCCTCAACCGCTT
CTCCGGGTCCGGTTTTGTTTCGTCAAAGTTGTACAATCACGGGTTCTTTA
GCGCCATGATCAAGTTGCCATCGGATCACACGGCTGGCTTATGTGTTGCA
TTCTATACGTCAAACGGAGACGTGTTCCCAAAAACACACGACGAATTAGA
CTTTGAGTTTCTAGGAAACGTGGCTGGAAAACCGTGGAGGTTCCAAACAA
ATTTCTATGGAAATGGGAGCACGGCACGTGGCAGAGAAGAGAGATACCAG
CTTTGGTTTGATCCCACGAAGCAATTTCATAGATATAGCATTCTTTGGAC
AAGCAACAACATTATATTCTATGTGGATGAAGTACCGATAAGGGAAGTCG
TGCGCTCAAAGGCAATGGGTGGTGATTTCCCATCAAAGCCAATGTCATTG
TACACAACAATTTGGGATGCC
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