DR405904

Overview
NameDR405904
Unique NameDR405904
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6303 contig Csv1_Contig6303:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31
Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYT-SNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPS-KPMSLYTTIWDA 721
            +FD  +   +GDG      +G+ + L L+R SGSGF + K Y  G     +KL   ++AG   A+Y  S GD    T DE+DFEFLGN+ G P+   TN Y  G     RE+++ LWFDPT  FH YS+LW  ++I+F VD++P+RE    + MG  +P  +PM LY+++W+A
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGD----TWDEIDFEFLGNLTGDPYTMHTNVYTQGKG--DREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNA 195          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31
Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            + FD+ Y   +   ++     G+ V+L L++ +G+GF +   Y  G FS  IKL    +AG   AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK +H YS+LW    I F+VD+ PIR    SK +G  +P  +PM LY+++W+A
Sbjct:   30 VPFDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQN---SEHDEIDFEFLGNRTGQPYILQTNVFSGGKG--DREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNA 197          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31
Identity = 73/173 (42.20%), Postives = 103/173 (59.54%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGN-LIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSK-PMSLYTTIWDA 721
            SF +     +GDG   +R  DGK + L L++ SGSGF S++ + +G     +KL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  GS    +E+++ LWFDPT  FH Y I W    IIF VD +PIRE   S+++G  FP+K PM LY ++W+A
Sbjct:   28 SFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNLSGHPYTLHTNVYTKGSG--DKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEA 195          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.712e-30
Identity = 72/163 (44.17%), Postives = 97/163 (59.51%), Query Frame = 2
Query:  239 GDGNLIRSPDGKN--VRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWD 718
            GD   + S DGK   V L L+R SGSGF S   Y  G FS  +KL   ++AG   +FY S+G+     HDE+D EF+GN++G P+   TN + NG   +  E ++ LWFDPT  FH Y I+W   NIIF VD+VP+R   +   +   +P SKPM L+ T+WD
Sbjct:   38 GDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGE--GDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKK--EHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLA--YPQSKPMRLHATLWD 194          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30
Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G  + L L++ SGSGF S K Y  G     +KL + ++AG   A+Y S+      THDE+DFEFLGN  GKP+   TN +  G     RE+++ LWFDPTK FH YSI+W   +IIF VD +PIR    ++ +G  FP S+PM +Y+++W+A
Sbjct:   47 GNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGA---THDEIDFEFLGNETGKPYVLHTNVFAQGKG--DREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNA 193          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.495e-30
Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGN-LIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSK-PMSLYTTIWDA 721
            SF +     +GDG   I    GK + L L++ SGSGF S++ + +G     +KL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  GS    +E+++ LWFDPT  FH Y I W    IIF VD +PIRE + +++ G  FP+K PM LY ++W+A
Sbjct:   23 SFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGSG--DKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEA 190          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.109e-29
Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGN-LIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSK-PMSLYTTIWDA 721
            SF +     +GDG   I   DGK + L L++ SGSGF S++ + +G     +KL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  G+    +E+++ LWFDPT  FH Y I W    IIF VD +PIRE    +A+G  FP++ PM LY ++W+A
Sbjct:   28 SFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGTG--DKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEA 195          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29
Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G+ + L L++ SGSGF S K Y  G     +KL + ++AG   A+Y S+      THDE+DFEFLGN++G P+   TN +  G     RE+++ LWFDPT+ FH YSI+W   +IIF VD  PIR    ++ +G  FP ++PM +Y+++W+A
Sbjct:   51 GQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQG---PTHDEIDFEFLGNLSGDPYILHTNIFTQGKG--NREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNA 197          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.892e-29
Identity = 70/171 (40.94%), Postives = 100/171 (58.48%), Query Frame = 2
Query:  212 FDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPS-KPMSLYTTIWDA 721
            F++ +   + D ++ +   G+ ++L L+  SG GF S K Y  G  S  IKL    +AG   AFY  N D      DELDFEFLGN +G+P+  QTN + +G     RE+R  LWFDP++ FH Y+I W    I+FYVD VPIR    ++A    +P  +PM +Y+T+W+A
Sbjct:   34 FEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYM-NSDT-DSVRDELDFEFLGNRSGQPYTVQTNVFAHGKG--DREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEA 200          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.892e-29
Identity = 69/172 (40.12%), Postives = 102/172 (59.30%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            SF + +   +G+G       G+ +   L++ SGSGF S K Y  G     +KL + ++AG   A+Y S+     +T DE+DFEFLGNV G+P+   TN +  G     RE ++ LWFDPT  FH Y++LW   NIIF VD +PIR    ++A G  +P S+PM +Y+++W+A
Sbjct:   25 SFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKG---ETWDEIDFEFLGNVTGQPYVLHTNVFTGGKG--NREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEA 191          
The following BLAST results are available for this feature:
BLAST of DR405904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH25_ARATH2.641e-3141.62Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT3.449e-3141.04Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH7.683e-3142.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ1.712e-3044.17Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH15_ARATH2.235e-3044.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH8.495e-3041.04Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH1.109e-2941.04Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN1.449e-2942.76Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH7_ARATH1.892e-2940.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH1.892e-2940.12Putative xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248C05 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405904 ID=DR405904; Name=DR405904; organism=Citrus sinensis; type=EST; length=721bp
GGGGAACACACACCGTAACAAATTTTATTTATAGAAACCAAAAATAATAA
TGGATTGGTTTCTTTGCTCTCAATCAAAAAAATCATCAGCACCCTTCACT
CTAATTCTAATTCTGTTGTGTTGCTGCTCATCACCATCACTTGTGTTCAC
ATTCACAAACGCAGCGTCGTCGTTGTCGTCATCATCTGCTTTCAACCTCG
CCACCATCTCTTTCGATGAAGGCTACTCTCATCTTTTCGGCGACGGCAAT
CTCATTCGCTCCCCCGACGGCAAGAACGTTCGTCTCCTCCTCAACCGCTT
CTCCGGGTCCGGTTTTGTTTCGTCAAAGTTGTACAATCACGGGTTCTTTA
GCGCCATGATCAAGTTGCCATCGGATCACACGGCTGGCTTATGTGTTGCA
TTCTATACGTCAAACGGAGACGTGTTCCCAAAAACACACGACGAATTAGA
CTTTGAGTTTCTAGGAAACGTGGCTGGAAAACCGTGGAGGTTCCAAACAA
ATTTCTATGGAAATGGGAGCACGGCACGTGGCAGAGAAGAGAGATACCAG
CTTTGGTTTGATCCCACGAAGCAATTTCATAGATATAGCATTCTTTGGAC
AAGCAACAACATTATATTCTATGTGGATGAAGTACCGATAAGGGAAGTCG
TGCGCTCAAAGGCAATGGGTGGTGATTTCCCATCAAAGCCAATGTCATTG
TACACAACAATTTGGGATGCC
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