DR405904

Overview
NameDR405904
Unique NameDR405904
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6303 contig Csv1_Contig6303:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.228e-29
Identity = 65/152 (42.76%), Postives = 93/152 (61.18%), Query Frame = 2
Query:  269 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G  ++L L++++G+GF +   Y  G FS  IK+    +AG   AF  S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK +HRYS+LW    I+F VD +PIR     K +G  FP ++PM +Y ++W+A
Sbjct:   51 GSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNA 197          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.228e-29
Identity = 69/173 (39.88%), Postives = 100/173 (57.80%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGN-LIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPS-KPMSLYTTIWDA 721
            SF +     +GDG   I    G  + L L++FSGSGF S + + +G     +KL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  G+    +E+++ LWFDPT  FH Y I+W    +IF +D +PIRE   S+A+G  FP  +PM LY ++W+A
Sbjct:   28 SFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGTG--DKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEA 195          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29
Identity = 70/172 (40.70%), Postives = 100/172 (58.14%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            SF + +   +G G       G+ +   L++ SGSGF S K Y  G     IKL   ++AG   A+Y S+     +T DE+DFEFLGNV G+P+   TN +  G     RE ++ LWFDPT  FH Y++LW   NIIF VD +PIR    ++A G  +P S+PM +Y+++W+A
Sbjct:   26 SFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKG---ETWDEIDFEFLGNVTGQPYVIHTNVFTGGKG--NREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEA 192          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.392e-29
Identity = 71/171 (41.52%), Postives = 97/171 (56.73%), Query Frame = 2
Query:  212 FDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDF-PSKPMSLYTTIWDA 721
            FDE Y   +   + +   +G+  +L L+ +SG+GF S   Y  G  S  IKL    +AG   AFY S+       H+E DFEFLGN  G+P+  QTN Y NG     RE+R  LWFDPT +FH YSILW+  +++F VDE PIR     +  G  F   + M +Y++IW+A
Sbjct:   29 FDELYRSSWAMDHCVN--EGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYIVQTNIYVNG--VGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNA 192          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.392e-29
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            +F       +GDG    + +G  + L L++ SGSGF S   Y  G     IKL + ++AG   A+Y  +      T DE+DFEFLGN++G P+   TN +  G     RE++++LWFDPT  FH YSILW    IIF VD  PIRE    ++ G  FP ++PM +Y+++W+A
Sbjct:   25 NFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTQGKG--DREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNA 191          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28
Identity = 69/171 (40.35%), Postives = 100/171 (58.48%), Query Frame = 2
Query:  212 FDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            F++     +GDG      +G  + L L++ SGSGF S   Y +G     IKL   ++AG    FY  +  +   T DE+DFEFLGNV+G P+   TN Y  G     RE+++ LWFDPT  FH YSILW  ++I+FY+D  PIRE    + +G  +P ++PM +Y ++W+A
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGL---TWDEIDFEFLGNVSGDPYIVHTNVYTQGKG--DREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNA 193          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28
Identity = 68/172 (39.53%), Postives = 98/172 (56.98%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            +F       +GDG      +G+ + L L++ SGSGF S   Y  G  S  +KL   ++AG     Y  +      T DE+DFEFLGN +G+P+   TN Y  G     +E++++LWFDPT  FH Y+ILW    IIF VD  PIRE    +++G  FP +KPM +Y+++W+A
Sbjct:   22 NFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGT---TWDEIDFEFLGNSSGEPYTLHTNVYTQGKG--DKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNA 188          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27
Identity = 67/162 (41.36%), Postives = 94/162 (58.02%), Query Frame = 2
Query:  239 GDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            G G ++ +  G+ + L L++ SGSGF S   Y  G     IKL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  G     +E+++ LWFDPT  FH YSILW    II  VD+ PIRE    +++G  FP +KPM +Y ++W+A
Sbjct:   35 GRGKILNN--GQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEG---STWDEIDFEFLGNMSGDPYTLHTNVYTQGKG--DKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNA 189          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 64/172 (37.21%), Postives = 98/172 (56.98%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            +F E +   +G+G      +G+ +   L++ SGSGF S K Y  G     +KL + ++AG   A+Y S+        DE+DFEFLGN  G P+   TN +  G     RE +++LWFDPT  FH Y++ W   NIIF VD +PIR    ++  G  +P ++PM +Y+++W+A
Sbjct:   29 NFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGT---AWDEIDFEFLGNRTGHPYTIHTNVFTGGKG--DREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEA 195          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.719e-26
Identity = 65/154 (42.21%), Postives = 88/154 (57.14%), Query Frame = 2
Query:  260 SPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPS-KPMSLYTTIWD 718
            S DG++  L L++ SG+ F S + +  G     IKL    + G  VA+Y S+        DE+DFEFLGNV G+P+  QTN Y  G     REER  LWFDP K FH YSILW  + I+F VD++PIR        G  +P  +PMS+  ++W+
Sbjct:   53 SNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQ---PNRDEIDFEFLGNVNGQPYILQTNVYAEGLD--NREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWN 201          
The following BLAST results are available for this feature:
BLAST of DR405904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTHB_PHAAN3.228e-2942.76Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH3.228e-2939.88Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH12_ARATH5.506e-2940.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH9_ARATH9.392e-2941.52Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH9.392e-2940.12Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH1.227e-2840.35Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH4.661e-2839.53Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH24_ARATH1.356e-2741.36Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH14_ARATH2.558e-2637.21Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH10_ARATH9.719e-2642.21Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248C05 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405904 ID=DR405904; Name=DR405904; organism=Citrus sinensis; type=EST; length=721bp
GGGGAACACACACCGTAACAAATTTTATTTATAGAAACCAAAAATAATAA
TGGATTGGTTTCTTTGCTCTCAATCAAAAAAATCATCAGCACCCTTCACT
CTAATTCTAATTCTGTTGTGTTGCTGCTCATCACCATCACTTGTGTTCAC
ATTCACAAACGCAGCGTCGTCGTTGTCGTCATCATCTGCTTTCAACCTCG
CCACCATCTCTTTCGATGAAGGCTACTCTCATCTTTTCGGCGACGGCAAT
CTCATTCGCTCCCCCGACGGCAAGAACGTTCGTCTCCTCCTCAACCGCTT
CTCCGGGTCCGGTTTTGTTTCGTCAAAGTTGTACAATCACGGGTTCTTTA
GCGCCATGATCAAGTTGCCATCGGATCACACGGCTGGCTTATGTGTTGCA
TTCTATACGTCAAACGGAGACGTGTTCCCAAAAACACACGACGAATTAGA
CTTTGAGTTTCTAGGAAACGTGGCTGGAAAACCGTGGAGGTTCCAAACAA
ATTTCTATGGAAATGGGAGCACGGCACGTGGCAGAGAAGAGAGATACCAG
CTTTGGTTTGATCCCACGAAGCAATTTCATAGATATAGCATTCTTTGGAC
AAGCAACAACATTATATTCTATGTGGATGAAGTACCGATAAGGGAAGTCG
TGCGCTCAAAGGCAATGGGTGGTGATTTCCCATCAAAGCCAATGTCATTG
TACACAACAATTTGGGATGCC
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