DR405893

Overview
NameDR405893
Unique NameDR405893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6302 contig Csv1_Contig6302:1..752. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_DEBHA (Calcineurin subunit B OS=Debaryomyces hansenii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.518e-16
Identity = 47/149 (31.54%), Postives = 85/149 (57.05%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            MG ASS + +  +E         F ++EI  L +RF +LD++  G I  +EFL++P  + NPL+ RL+ + D      ++F++F+  LS FS K S   K++  FK+YD D +G +   ++  V++ + G  + DE+ +Q++ +   +A
Sbjct:    1 MGVASSKILENLMEGTN------FDKEEIERLRKRFMKLDKDGSGTIDKNEFLTIPGISSNPLAARLMDVFDEDGNGTIDFQEFIMGLSAFSGKTSKLDKLKFAFKIYDIDRDGYIGNGELFIVMKMMVGKNLQDEELQQIVDKTMMEA 143          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB1_RAT (Calcineurin subunit B type 1 OS=Rattus norvegicus GN=Ppp3r1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 43/126 (34.13%), Postives = 77/126 (61.11%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++ +   +A
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 140          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB1_MOUSE (Calcineurin subunit B type 1 OS=Mus musculus GN=Ppp3r1 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 43/126 (34.13%), Postives = 77/126 (61.11%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++ +   +A
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 140          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB1_HUMAN (Calcineurin subunit B type 1 OS=Homo sapiens GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 43/126 (34.13%), Postives = 77/126 (61.11%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++ +   +A
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 140          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB1_BOVIN (Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 43/126 (34.13%), Postives = 77/126 (61.11%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++ +   +A
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 140          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 43/148 (29.05%), Postives = 86/148 (58.11%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKD 739
            MG A S +    +++        F + EI  L +RF +LD+++ G I   EF+S+P  + NPL++R++++ D      ++F++F+  LS+FS +     K++  F++YD D +G +S  ++  VL+ + G+ + DEQ +Q++ +   +
Sbjct:    1 MGAAPSRIVDNLLDDTN------FDRAEIERLKKRFMKLDKDSSGSIDKTEFMSIPGVSANPLAKRIIEVFDEDNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGELFIVLKIMVGTNLEDEQLQQIVDRTIME 142          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB2_DROME (Calcineurin subunit B type 2 OS=Drosophila melanogaster GN=CanB2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.842e-16
Identity = 44/123 (35.77%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  368 CHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            C N F   EI  L +RF +LD +  G +S DEF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K     K++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++
Sbjct:   12 CSN-FDADEIRRLGKRFRKLDLDNSGALSVDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 43/123 (34.96%), Postives = 74/123 (60.16%), Query Frame = 2
Query:  368 CHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            C N F   EI  L +RF +LD +  G +S DEF+S+PE   NPL QR++ + D      ++FK+F+  +S FS +     K++  F++YD D +G +S  ++ +VL+ + G+ + D Q +Q++
Sbjct:   12 CSN-FDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CANB2_HUMAN (Calcineurin subunit B type 2 OS=Homo sapiens GN=PPP3R2 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.421e-14
Identity = 41/119 (34.45%), Postives = 73/119 (61.34%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL +R++ + D      ++FK+F+   S FS K   +QK++  F +YD D +G +S  ++ +VL+ + G+ ++D Q +Q++
Sbjct:   15 FDNDEIKRLGRRFKKLDLDKSGSLSVEEFMSLPELRHNPLVRRVIDVFDTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMVGNNLTDWQLQQLV 133          
BLAST of DR405893 vs. ExPASy Swiss-Prot
Match: CHP1_CHICK (Calcium-binding protein p22 OS=Gallus gallus GN=CHP PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.856e-14
Identity = 49/161 (30.43%), Postives = 83/161 (51.55%), Query Frame = 2
Query:  320 ASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMV-----DGLNFKDFVAFLSVF---------------SAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            AS++L   +IEE+++     FS  +I  LY RF  LD+   G +S ++F  +PE A+NPL  R++        D +NF+ F+  L+ F                   S   K+   F++YD D + K+S +++L+VLR + G  +SDEQ   +  +  ++A
Sbjct:    5 ASTLLRDEEIEEIKKETG--FSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDQNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEA 163          
The following BLAST results are available for this feature:
BLAST of DR405893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CANB_DEBHA1.518e-1631.54Calcineurin subunit B OS=Debaryomyces hansenii GN=... [more]
CANB1_RAT3.383e-1634.13Calcineurin subunit B type 1 OS=Rattus norvegicus ... [more]
CANB1_MOUSE3.383e-1634.13Calcineurin subunit B type 1 OS=Mus musculus GN=Pp... [more]
CANB1_HUMAN3.383e-1634.13Calcineurin subunit B type 1 OS=Homo sapiens GN=PP... [more]
CANB1_BOVIN3.383e-1634.13Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3... [more]
CANB_KLULA4.418e-1629.05Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
CANB2_DROME9.842e-1635.77Calcineurin subunit B type 2 OS=Drosophila melanog... [more]
CANB1_DROME2.864e-1534.96Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
CANB2_HUMAN1.421e-1434.45Calcineurin subunit B type 2 OS=Homo sapiens GN=PP... [more]
CHP1_CHICK1.856e-1430.43Calcium-binding protein p22 OS=Gallus gallus GN=CH... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B15 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B15 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405893 ID=DR405893; Name=DR405893; organism=Citrus sinensis; type=EST; length=752bp
GGGGACGAGGAATATCCCACGCAATTCTCCGAAAATCAACGGCCGATAAA
ACGACGAAACATAAAAAAGAATGTTACTGCGTGACAGAGAATAATCGGTG
ATGAGGATGAACATCAGATTCCTCGTCATCTAGTACAAACAAAATACTAT
TCTGTGTGTTTTCAATGGCTCGATGATGACGAAGGAGTTTCTGTCATCTA
TATTTCCCGATACTTCATCTTCATCTAAACTCATCTCCTAGCGGTCGGTT
CTTTTTTTCCTACATTTTCTGTTTGTTTCCCGAGAAAACCCAGTTTTGGA
GCGAGAATCAATGGGGACTGCCTCGTCTATGCTAACTCAATATGATATTG
AAGAGGTTCAACAGCACTGCCACAATCTATTTTCTCAACAAGAAATAGTG
TCGTTGTACCAAAGGTTTTGCCAGCTAGATAGAAATGCCAAGGGATTCAT
CTCTGCAGATGAGTTCTTGTCGGTGCCTGAATTTGCAATGAATCCACTTT
CTCAGAGGTTGCTAAAGATGGTGGATGGGTTGAACTTCAAGGATTTTGTG
GCCTTCTTGTCTGTTTTCAGTGCTAAGGCAAGCATGCAGCAGAAAGTTCA
GCTTATTTTCAAAGTGTACGACTCAGACTGTAATGGAAAGGTTTCTTTCA
ATGACATATTGGAAGTGCTGCGGGATTTGTCTGGTTCTTTTATGTCCGAT
GAGCAAAGAGAGCAAGTCTTGACCCAAGTATTCAAGGATGCAGGTTACAC
AA
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