DR405889

Overview
NameDR405889
Unique NameDR405889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB1_RAT (Calcineurin subunit B type 1 OS=Rattus norvegicus GN=Ppp3r1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 122          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB1_MOUSE (Calcineurin subunit B type 1 OS=Mus musculus GN=Ppp3r1 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 122          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB1_HUMAN (Calcineurin subunit B type 1 OS=Homo sapiens GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 122          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB1_BOVIN (Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+
Sbjct:   15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 122          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB2_DROME (Calcineurin subunit B type 2 OS=Drosophila melanogaster GN=CanB2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  368 CHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            C N F   EI  L +RF +LD +  G +S DEF+S+PE   NPL QR++ + D      ++FK+F+  +S FS K     K++  F++YD D +G +S  ++ +VL+ + G+
Sbjct:   12 CSN-FDADEIRRLGKRFRKLDLDNSGALSVDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGN 122          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB_DEBHA (Calcineurin subunit B OS=Debaryomyces hansenii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 43/130 (33.08%), Postives = 74/130 (56.92%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSG 685
            MG ASS + +  +E         F ++EI  L +RF +LD++  G I  +EFL++P  + NPL+ RL+ + D      ++F++F+  LS FS K S   K++  FK+YD D +G +   ++  V++ + G
Sbjct:    1 MGVASSKILENLMEGTN------FDKEEIERLRKRFMKLDKDGSGTIDKNEFLTIPGISSNPLAARLMDVFDEDGNGTIDFQEFIMGLSAFSGKTSKLDKLKFAFKIYDIDRDGYIGNGELFIVMKMMVG 124          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 39/131 (29.77%), Postives = 76/131 (58.02%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            MG A S +    +++        F + EI  L +RF +LD+++ G I   EF+S+P  + NPL++R++++ D      ++F++F+  LS+FS +     K++  F++YD D +G +S  ++  VL+ + G+
Sbjct:    1 MGAAPSRIVDNLLDDTN------FDRAEIERLKKRFMKLDKDSSGSIDKTEFMSIPGVSANPLAKRIIEVFDEDNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGELFIVLKIMVGT 125          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  368 CHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            C N F   EI  L +RF +LD +  G +S DEF+S+PE   NPL QR++ + D      ++FK+F+  +S FS +     K++  F++YD D +G +S  ++ +VL+ + G+
Sbjct:   12 CSN-FDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGN 122          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB2_HUMAN (Calcineurin subunit B type 2 OS=Homo sapiens GN=PPP3R2 PE=2 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            F   EI  L +RF +LD +  G +S +EF+S+PE   NPL +R++ + D      ++FK+F+   S FS K   +QK++  F +YD D +G +S  ++ +VL+ + G+
Sbjct:   15 FDNDEIKRLGRRFKKLDLDKSGSLSVEEFMSLPELRHNPLVRRVIDVFDTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMVGN 122          
BLAST of DR405889 vs. ExPASy Swiss-Prot
Match: CANB2_RAT (Calcineurin subunit B type 2 OS=Rattus norvegicus GN=Ppp3r2 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 36/108 (33.33%), Postives = 64/108 (59.26%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGS 688
            F   EI  L + F ++D +  G +S DEF+S+PE   NPL  R++ + D      ++F++F+   S FS K   +QK++  F++YD D +G +S  ++ +VL+ + G+
Sbjct:   15 FDHDEIKRLGRSFKKMDLDKSGSLSVDEFMSLPELQQNPLVGRVIDIFDTDGNGEVDFREFIVGTSQFSVKGDEEQKLRFAFRIYDMDNDGFISNGELFQVLKMMVGN 122          
The following BLAST results are available for this feature:
BLAST of DR405889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
CANB1_RAT6.197e-1436.11Calcineurin subunit B type 1 OS=Rattus norvegicus ... [more]
CANB1_MOUSE6.197e-1436.11Calcineurin subunit B type 1 OS=Mus musculus GN=Pp... [more]
CANB1_HUMAN6.197e-1436.11Calcineurin subunit B type 1 OS=Homo sapiens GN=PP... [more]
CANB1_BOVIN6.197e-1436.11Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3... [more]
CANB2_DROME1.057e-1336.61Calcineurin subunit B type 2 OS=Drosophila melanog... [more]
CANB_DEBHA1.381e-1333.08Calcineurin subunit B OS=Debaryomyces hansenii GN=... [more]
CANB_KLULA3.076e-1329.77Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
CANB1_DROME3.076e-1335.71Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
CANB2_HUMAN6.852e-1335.19Calcineurin subunit B type 2 OS=Homo sapiens GN=PP... [more]
CANB2_RAT3.401e-1233.33Calcineurin subunit B type 2 OS=Rattus norvegicus ... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B11 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405889 ID=DR405889; Name=DR405889; organism=Citrus sinensis; type=EST; length=698bp
GGGGACGAGGAATATCCCACGTAATTCTCCGAAAATCAACGGCCGATAAA
ACGACGAAACATAAAAAAGAATGTTACTGCGTGACAGAGAATAATCGGTG
ATGAGGATGAACATCAGATTCCTCGTCATCTAGTACAAACAAAATACTAT
TCTGTGTGTTTTCAATGGCTCGATGATGACGAAGGAGTTTCTGTCATCTA
TATTTCCCGATACTTCATCTTCATCTAAACTCATCTCCTAGCGGTCGGTT
CTTTTTTTCCTACATTTTCTGTTTGTTTCCCGAGAAAACCCAGTTTTGGA
GCGAGAATCAATGGGGACTGCCTCGTCTATGCTAACTCAATATGATATTG
AAGAGGTTCAACAGCACTGCCACAATCTATTTTCTCAACAAGAAATAGTG
TCGTTGTACCAAAGGTTTTGCCAGCTAGATAGAAATGCCAAGGGATTCAT
CTCTGCAGATGAGTTCTTGTCGGTGCCTGAATTTGCAATGAATCCACTTT
CTCAGAGGTTGCTAAAGATGGTGGATGGGTTGAACTTCAAGGATTTTGTG
GCCTTCTTGTCTGTTTTCAGTGCTAAGGCAAGCATGCAGCAGAAAGTTCA
GCTTATTTTCAAAGTGTACGACTCAGACTGTAATGGAAAGGTTTCTTTCA
ATGACATATTGGAAGTGCTGCGGGATTTGTCTGGTTCTTTTATGTCCG
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