DR405880

Overview
NameDR405880
Unique NameDR405880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5704 contig Csv1_Contig5704:54..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.546e-48
Identity = 103/218 (47.25%), Postives = 140/218 (64.22%), Query Frame = 2
Query:   44 KGESLLLVKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCN-ITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGE-DYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEES 679
            +G  +  VK QG CGSCW F+ TGA+EGIN + TG+L+SLSEQEL+DCD    ++GC GG   +AFE++  NGGI ++  Y YTG D   C  I  + T+VV+I+G++ V  +D   L  AV  QPISV +  SA++   Y SG+Y G CSN   + DH VLIVGYG+ + E DYW+++NSWG  WG  GY  + R+     GKCA+     YPI+ +
Sbjct:  136 RGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMI--SAANMSDYKSGVYKGACSN--LWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEPTGKCAVAVAPVYPIKSN 349          

HSP 2 Score: 24.6386 bits (52), Expect = 6.546e-48
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P  +DWR+RG V P
Sbjct:  128 PDEVDWRERGAVVP 141          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.091e-47
Identity = 98/206 (47.57%), Postives = 130/206 (63.11%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALL--CAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGS-ENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VKDQG CGSCW FS+TGA+EG +    G L+SLSEQ LVDC T   + GC+GG MD AF ++ +NGGIDTE  YPY G+D +C+  K  T   +  G+ D+   D   +    A   P+SV +  S   FQLY+ G+YN +   D   +DH VL+VGYG+ E+G DYW+VKNSWGT+WG  GY  + R+   +  +C I   +SYP
Sbjct:  137 VKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNK-ATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYN-EPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARN---QNNQCGIATASSYP 337          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.861e-47
Identity = 95/225 (42.22%), Postives = 132/225 (58.67%), Query Frame = 2
Query:    5 YNHAKHHRAWIGGKGESLLL-VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPS-DSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIE 673
            Y H  ++   I  + +  +  VK+QG+CGSCW FST   +EGIN +VTG+L+ LSEQELVDCD  SYGC GGY   + ++V NN G+ T   YPY      C  T +    V I GYK V  + +++ L A   QP+SV +      FQLY SG+++G C      +DHAV  VGYG+ +G++Y I+KNSWG +WG  GY  + R +    G C +   + YP +
Sbjct:  129 YKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTK---LDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 349          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 1.892e-47
Identity = 94/204 (46.08%), Postives = 127/204 (62.25%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VK+QG CGSCW FS+ GA+EG     TG L++LS Q LVDC T +YGC GGYM  AF++V  NGGID+E  YPY G D +C +     K     GY+++   +   L  AV +  PISV +  S + FQ Y+ G+ Y+ +C  D   ++HAVL+VGYG++ G  +WI+KNSWG SWG  GY  + R+ +     C I  MAS+P
Sbjct:  130 VKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKN---NACGITNMASFP 327          

HSP 2 Score: 25.409 bits (54), Expect = 1.892e-47
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P S+D+RK+G VTP
Sbjct:  116 PDSIDYRKKGYVTP 129          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.430e-47
Identity = 107/245 (43.67%), Postives = 140/245 (57.14%), Query Frame = 2
Query:    2 GYNHAKHHRAWIGGKGESLLL--------------VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSE----NGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPI 670
            GY H KH +  +  +   L +              VK+QG CGSCW FS +G +EG   L TG LISLSEQ LVDC  D  + GC+GG MD+AF+++  NGG+D+E  YPY   DG+C   + E  V +  G+ D+   + AL+ A A   PISV M  S    Q Y+SGI Y  +CS+    +DH VL+VGYG E    N + YW+VKNSWG  WG+DGY  I +D +     C +   ASYPI
Sbjct:   94 GYRHQKHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKD--LDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRN---NHCGLATAASYPI 332          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 3.210e-47
Identity = 98/208 (47.12%), Postives = 125/208 (60.10%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAA-VQQPISVGMVGSASDFQLYTSGIYNGD-CSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGK--CAINAMASYPI 670
            VKDQG CGSCW FSTTG++E      TG  +SLSEQ+LVDC T   ++GC GG    AFE++  NGG+DTE  YPYTGV+G C+   E   V  +D       ++  L  A  + +P+SV      + F++Y SG+Y  D C   P  ++HAVL VGYG ENG  YW++KNSWG  WG +GYF       +E GK  C I   ASYPI
Sbjct:  160 VKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQ-VINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYF------KMEMGKNMCGIATCASYPI 360          

HSP 2 Score: 23.483 bits (49), Expect = 3.210e-47
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P + DWR+ GIV+P
Sbjct:  146 PETKDWREDGIVSP 159          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.213e-47
Identity = 92/204 (45.10%), Postives = 127/204 (62.25%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGI-YNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VK+QG CGSCW FS+ GA+EG     TG L++LS Q LVDC + +YGC GGYM  AF++V  NGGID+E  YPY G D +C +     K     GY+++   +   L  AV +  P+SV +  S + FQ Y+ G+ Y+ +C  D   ++HAVL+VGYG++ G  YWI+KNSWG SWG  GY  + R+ +     C I  +AS+P
Sbjct:  130 VKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKN---NACGITNLASFP 327          

HSP 2 Score: 25.409 bits (54), Expect = 3.213e-47
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P S+D+RK+G VTP
Sbjct:  116 PDSIDYRKKGYVTP 129          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.185e-47
Identity = 92/202 (45.54%), Postives = 115/202 (56.93%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSA-LLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            V+ QGSCGSCW FS    +EGIN + TG L+ LSEQELVDC+  S+GC GGY  YA E+V  N GI   S YPY    GTC   +    +V   G   V+P++   LL A  +QP+SV +      FQLY  GI+ G C      +DHAV  VGYG   G+ Y ++KNSWGT+WG  GY  I R      G C +   + YP
Sbjct:  148 VRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTK---VDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYP 345          

HSP 2 Score: 27.335 bits (59), Expect = 4.185e-47
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTP 63
            P ++DWRK+G VTP
Sbjct:  134 PENVDWRKKGAVTP 147          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 7.070e-47
Identity = 96/207 (46.38%), Postives = 133/207 (64.25%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQQ--PISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGS-ENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPI 670
            VKDQG CGSCW FS+TGA+EG +   +G L+SLSEQ LVDC T   + GC+GG MD AF ++ +NGGIDTE  YPY  +D +C+  K  T   +  G+ D+   D   +  AV    P+SV +  S   FQ Y+ G+YN +   D   +DH VL+VG+G+ E+GEDYW+VKNSWGT+WG  G+  + R+   +  +C I + +SYP+
Sbjct:  169 VKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNK-GTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYN-EPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN---KENQCGIASASSYPL 370          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.208e-46
Identity = 96/209 (45.93%), Postives = 125/209 (59.81%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCA-AVQQPISVGMVGSASDFQLYTSGIY-NGDCSNDPYYIDHAVLIVGYGSENGED----YWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VK+QG CGSCW FS TGA+EG     TG L+SLSEQ LVDC     + GC+GG MDYAF++V +NGG+D+E  YPY   + +C    E + V +  G+ D+   + AL+ A A   PISV +      F  Y  GIY   DCS++   +DH VL+VGYG E+ E     YW+VKNSWG  WG+ GY  + +D       C I + ASYP
Sbjct:  129 VKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYS-VANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSED--MDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKD---RRNHCGIASAASYP 331          

HSP 2 Score: 30.0314 bits (66), Expect = 1.208e-46
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTP 63
            EAP S+DWR++G VTP
Sbjct:  113 EAPRSVDWREKGYVTP 128          
The following BLAST results are available for this feature:
BLAST of DR405880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
CPR2_ARATH6.546e-4847.25Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATL_SARPE1.091e-4747.57Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
PAPA2_CARPA1.861e-4742.22Chymopapain OS=Carica papaya PE=1 SV=2[more]
CATK_MOUSE1.892e-4746.08Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATL1_RAT2.430e-4743.67Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
ORYC_ORYSJ3.210e-4747.12Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATK_RAT3.213e-4745.10Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
PAPA3_CARPA4.185e-4745.54Caricain OS=Carica papaya PE=1 SV=2[more]
CATL_DROME7.070e-4746.38Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATL1_CERAE1.208e-4645.93Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B01 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405880 ID=DR405880; Name=DR405880; organism=Citrus sinensis; type=EST; length=688bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTAGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGNNG
TTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGA
CCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCT
ATGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAAC
AACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGG
TACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTT
ATAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAA
CAACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATA
TACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTG
ATCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTAT
TGGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTT
TTACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATG
CTATGGCTTCTTATCCAATCGAAGAATCCTATGCACCA
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