DR405255

Overview
NameDR405255
Unique NameDR405255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR405255 vs. ExPASy Swiss-Prot
Match: THI4_PYRIL (Putative thiazole biosynthetic enzyme OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_1998 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 54/197 (27.41%), Postives = 95/197 (48.22%), Query Frame = 3 
Query:   90 VSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKA 671
            ++R + +  + D+  Y+D D    GAG AGL+ A  L++  + ++ + E+  S GGG   GG +   +VV++ A   L +  I Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M   + S +DP   +AK V+ + GHD    +   +++  +G+  EV G K+
Sbjct:    5 IARAIIKHGLEDLYEYSDVDVAIVGAGPAGLTAARYLAERGH-KVVVYERRFSFGGGIGPGGNMIPKIVVQEEAVPVLRDFKIRYKPVGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVVGLLWVWTPIQM---SGSHVDPLYTQAKAVLDATGHDAEVISIAARKVPELGI--EVRGEKS 193
The following BLAST results are available for this feature:
BLAST of DR405255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
THI4_PYRIL6.198e-1127.41Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240O06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240O06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405255 ID=DR405255; Name=DR405255; organism=Citrus sinensis; type=EST; length=687bp
GGGGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGAC
TTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGA
AATGACACGCAGGTACATGACGGACATGATCACTTATGCTGACACTGATG
TGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTC
AGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCC
CGGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTGC
GCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAG
CAAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTAT
AATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGG
CAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACC
AACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCTTGCATGGATCC
CAATGTAATGGAAGCGAAGGTGGTTGTGAGCTCTTGTGGCCATGATGGGC
CTTTTGGGGCCACTGGAGTAAAGAGGTTGAAGAGTATCGGAATGATTGAG
GAAGTGCCTGGAATGAAGGCACTGGACATGAACTCTG
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