DR405052

Overview
NameDR405052
Unique NameDR405052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 8.068e-23
Identity = 65/216 (30.09%), Postives = 108/216 (50.00%), Query Frame = 1
Query:   76 GGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVI 723
            GG+++ + A+ ++++  P+++ +++A PLLC GITV+ PL    +                                 S++P+K+ E L  +GAD  +NSRDP  L+   G  D II+TV+      P    L   G    VGA   PL +P  +LI G ++VSGS+TG   E ++++ FAA+  +    E+  M  +N A++ +     RYR V+
Sbjct:  122 GGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTA-FSSNPAKEQEVLA-MGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVL 335          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.004e-22
Identity = 62/227 (27.31%), Postives = 111/227 (48.90%), Query Frame = 1
Query:   49 INTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 729
            I   G IT+GGYS+ ++  + ++ +FP ++ ++  APL+CAG T YSPL+   +                                I+ +  K  +++ +LGA+  + S +  Q+    G+ D I+ T+   H I+P + LLK +  +  VG    P  +  + L      +  S   G  E +EM+ F ++HNI  D+++I  D +N   ++L ++  +YR+VIDI
Sbjct:  192 IKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLRQAKVGP-GMKVGIVGIGGLGHIAVKIAKAMGAHVVAITRTEWKFKDSVNNLGANESILSTNVWQMNQHKGSFDFILSTIPMAHDIVPYIELLKYKATICTVGELF-PTVINGMDLAQHPCFLQSSLIAGSDEIKEMLAFCSEHNIMPDVQIIKADKINDTRQKLLESKAKYRYVIDI 416          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.068e-19
Identity = 69/247 (27.94%), Postives = 121/247 (48.99%), Query Frame = 1
Query:    4 DLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNS-RDPDQLQGAMGTLDGIIDTVSAV----HPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDY--VNTAMERLAKADVRYRFVI 723
            D E YC K + TYS    DG ++ GGY++++  +E ++V  P+++P   AAPLLC G+TVYSPL   G                                 IS S  K+ +A++ +GAD ++ +  + D  +    T D I+   S++      I+P    +K  G++V +  P++   L +    +   ++S S+ G +KE  +++   ++ +I   +E + +    V+ A ER+ K DVRYRF +
Sbjct:  109 DNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMP--KAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTL 351          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16
Identity = 60/243 (24.69%), Postives = 103/243 (42.39%), Query Frame = 1
Query:   10 ENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAV---HPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 729
            E  CP  +    S++       GGY+++  A   Y+ + PD++     AP+LCAG+T Y  LK  G A                               +  S  +K++  + LGAD  +N    D ++     + G+   +S              +K  G LV+VG P+  L +P+   ++   +V GS  G  K+ QE +DFAA+  +   +E   ++ +N   ER+ K  +  R V+ +
Sbjct:  103 ETLCPHQLNGGYSVD-------GGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSG-ARPGEWVAIYGIGGLGHIALQYAKAMGLNVVAVDIS-DEKSKLAKDLGADIAINGLKEDPVKAIHDQVGGVHAAISVAVNKKAFEQAYQSVKRGGTLVVVGLPNADLPIPIFDTVLNGVSVKGSIVGTRKDMQEALDFAARGKVRPIVETAELEEINEVFERMEKGKINGRIVLKL 336          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16
Identity = 57/221 (25.79%), Postives = 95/221 (42.99%), Query Frame = 1
Query:   76 GGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKS---QGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 729
            GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G A+                              +     +K E  + LGAD  +N +  D  Q     + G+  TV             KS    G  VLVG P + + +P+   ++    + GS  G  K+ QE + FAA+  +   +EV  ++ +N   +R+ K  +  R V+ +
Sbjct:  118 GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDLG-DEKLELAKQLGADLVVNPKHDDAAQWIKEKVGGVHATVVTAVSKAAFESAYKSIRRGGACVLVGLPPEEIPIPIFDTVLNGVKIIGSIVGTRKDLQEALQFAAEGKVKTIVEVQPLENINDVFDRMLKGQINGRVVLKV 336          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 54/221 (24.43%), Postives = 96/221 (43.44%), Query Frame = 1
Query:   76 GGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQ---LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 729
            GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G A+                              +     +K E  + LGAD  +N    D    ++  +G +   + T  +          ++  G  VLVG P + + +P+   ++    + GS  G  K+ QE + FAA+  +   IEV  ++ +N   +R+ K  +  R V+ +
Sbjct:  118 GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG-DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVLTL 336          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15
Identity = 65/247 (26.32%), Postives = 118/247 (47.77%), Query Frame = 1
Query:    4 DLENYCPK-MILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRD----PDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIE--VISMDYVNTAMERLAKADVRYRFVI 723
            D E YC    +LT  +   DG I+ GG++ H+  +E + ++ P+++P   AAPLLC GITV+SPL   G                                  S   SK+ ++++ LGAD ++   +     +Q   A+  L     ++S V+    ++ ++K  G +V + AP+   +L +  L +   ++S S+ G  KE ++++   ++ N+   +E   IS + V+ A  R+   DV+YRF +
Sbjct:  109 DNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPLLRNGCG-PGKRVGIVGIGGIGHMGILLAKAMGAEVYAFSRGHSKREDSMK-LGADHYIAMLEDKGWTEQYSNALDLLVVCSSSLSKVN-FDSIVKIMKIGGSIVSIAAPEVNEKLVLKPLGLMGVSISSSAIGSRKEIEQLLKLVSEKNVKIWVEKLPISEEGVSHAFTRMESGDVKYRFTL 352          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15
Identity = 58/221 (26.24%), Postives = 99/221 (44.80%), Query Frame = 1
Query:   76 GGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPD---QLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 729
            G ++ + +A+  ++ R P  +    AAP+LCAG+TVY  LK   +                                    P K   A E LGAD  +++R PD   ++Q   G L G + T  +   +     +L+S+G + LVG P   + LPV   ++ R TV GS  G  ++ +E ++FA +  + A      ++ +N   ER+ +  +  R V+D+
Sbjct:  120 GTFAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLKETEV-RPGEWVLVSGIGGLGHMAVQYAKAMGMHVAAADIFPDKLALA-EKLGADLVVDARAPDAVEEVQRRTGGLHGALVTAVSPKAMEQAYSMLRSKGTMALVGLPPGQICLPVFDTVLKRITVRGSIVGTRQDLEEALEFAGEGKVAAHFSWDKIENINAIFERMEEGKIDGRIVLDL 338          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 51/226 (22.57%), Postives = 98/226 (43.36%), Query Frame = 1
Query:   76 GGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGT-----LDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 738
            G  ++ ++ +  Y V+ P+++   AA+ + CAG+T Y  +K  G+                                   +  K   A E LGAD+ +NS + D ++          LD  + T  A  P    + ++K+  ++V VG P   ++L +  L++    V GS  G  ++ +E   FAA++ +   I++  +  +N   + + K  +  R VID+ +T
Sbjct:  115 GAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKE-LGADAIINSTNVDPIEEVNRLTNNKGLDATVITAVAKTPFNQAVDVVKAGARVVAVGLPVDKMDLDIPRLVLDGIEVVGSLVGTRQDLREAFQFAAENKVIPKIQLRQLSEINDIFDEMEKGTITGRMVIDMKST 339          
BLAST of DR405052 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 49/226 (21.68%), Postives = 98/226 (43.36%), Query Frame = 1
Query:   76 GGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGT-----LDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 738
            G  ++ ++ +  Y V+ P+++   AA+ + CAG+T Y  +K  G+                                   +  K   A E LGAD+ +NS + D ++          LD  + T  A  P    + ++K+  ++V VG P   ++L +  L++    V GS  G  ++ +E   FAA++ +   +++  +  +N   + + K  +  R VID+ ++
Sbjct:  115 GAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKE-LGADAIINSTNVDPIEEVNRLTNNKGLDATVITAVAKTPFNQAVDVVKAGARVVAVGLPVDKMDLDIPRLVLDGIEVVGSLVGTRQDLREAFQFAAENKVIPKVQLRQLSEINDIFDEMEKGTITGRMVIDMKSS 339          
The following BLAST results are available for this feature:
BLAST of DR405052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
YJGB_ECOLI8.068e-2330.09Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
YL498_MIMIV4.004e-2227.31Probable zinc-type alcohol dehydrogenase-like prot... [more]
ADH6_YEAST7.068e-1927.94NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
ADH2_BACST1.128e-1624.69Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_BACST1.474e-1625.79Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_BACST1.629e-1524.43Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH7_YEAST2.128e-1526.32NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
ADHA_RHIME4.741e-1526.24Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH_STAES4.437e-1322.57Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH_STAEQ1.686e-1221.68Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240D15 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240D15 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405052 ID=DR405052; Name=DR405052; organism=Citrus sinensis; type=EST; length=740bp
GGGGACCTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGTTCCAT
TAACACTGACGGAACAATCACATTCGGAGGCTACTCTGATCACATGGTTG
CCAATGAGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCT
GCTGCTCCTCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATA
CTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCG
GGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTTTGGGGCCAAAGTG
ACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGAAGCTCTTGAACATCT
TGGCGCTGATTCATTTTTGAATAGCCGTGACCCTGACCAATTGCAGGGTG
CCATGGGCACATTGGATGGTATTATTGACACGGTGTCCGCTGTGCACCCC
ATTTTGCCATTGCTCGGTCTATTAAAGTCCCAGGGCAAGCTTGTTCTGGT
TGGTGCTCCGGACAAGCCACTCGAGCTACCTGTGATTTCCTTAATTATGG
GGAGGAAGACGGTGTCAGGGAGCAGCACTGGGGGAATGAAAGAGACGCAA
GAGATGATTGATTTTGCAGCAAAACACAATATAACAGCTGACATTGAGGT
TATTTCGATGGATTATGTCAATACGGCAATGGAGCGGCTCGCCAAGGCTG
ATGTTCGGTATCGATTTGTCATTGATATTGCAAACACCTT
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