DR405027

Overview
NameDR405027
Unique NameDR405027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 8.617e-39
Identity = 75/131 (57.25%), Postives = 99/131 (75.57%), Query Frame = 3
Query:  150 APFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            A   TT +G PV +  + +T+GPRGP+L++D    +++A+FDRERIPERVVHA+GAGA G+ EVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF
Sbjct:   24 ADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF 154          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATB_ASPFU (Catalase B OS=Aspergillus fumigatus GN=catB PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.049e-39
Identity = 74/132 (56.06%), Postives = 88/132 (66.67%), Query Frame = 3
Query:  147 NAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            N  F T++ G P+ + NS ++ G RGP LLED+   +K+  FD ER+PER VHARGAGA G      D SN+T A FL   G QTPV VRFSTV   RGS +  RD  GFA +FYT EGNFD+VGNN PVFF
Sbjct:   51 NDAFMTSDVGGPIEDQNS-LSAGERGPTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLAKEGKQTPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFF 181          

HSP 2 Score: 34.6538 bits (78), Expect = 9.049e-39
Identity = 12/28 (42.86%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  532 PSFFVRDGMKFPDMVHALKPNPKSHIQE 615
            P FF++D + FPD++HA+KP   + I +
Sbjct:  178 PVFFIQDAILFPDLIHAVKPRGDNEIPQ 205          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.050e-39
Identity = 76/132 (57.58%), Postives = 86/132 (65.15%), Query Frame = 3
Query:  147 NAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            N  F TT+ G  +     S+  G RG  LLED+   +KL +FD ERIPERVVHARGAGA G      D SN+T A FL A   QTPV VRFSTV   RGS +T RD  GFA +FYT EGNFD+VGNN PVFF
Sbjct:   51 NGQFMTTDFGGNI-EEQFSLKAGGRGSTLLEDFIFRQKLQHFDHERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFF 181          

HSP 2 Score: 38.5058 bits (88), Expect = 9.050e-39
Identity = 11/28 (39.29%), Postives = 23/28 (82.14%), Query Frame = 1
Query:  532 PSFFVRDGMKFPDMVHALKPNPKSHIQE 615
            P FF++D ++FPD++H++KP+P + + +
Sbjct:  178 PVFFIQDAIRFPDLIHSVKPSPDNEVPQ 205          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATA_PIG (Catalase OS=Sus scrofa GN=CAT PE=1 SV=4)

HSP 1 Score: 159.844 bits (403), Expect = 1.125e-38
Identity = 74/127 (58.27%), Postives = 97/127 (76.38%), Query Frame = 3
Query:  162 TTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            TT SG P+ +  + +T GPRGP+L++D    +++A+FDRERIPERVVHA+GAGA G+ EVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF
Sbjct:   28 TTGSGNPIGDKLNILTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRFSKAKVFEHVGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF 154          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.179e-38
Identity = 71/127 (55.91%), Postives = 87/127 (68.50%), Query Frame = 3
Query:  162 TTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            TT+ G P+  +  S+  G RGP LLED+   +K+ +FD ER+PER VHARGAGA G     ++ SN+T A FL A G QTPV VRFSTV   RGS ++ RD  GFA + YT EGNFD+VGNN PVFF
Sbjct:   61 TTDVGGPI-EDQHSLKAGNRGPTLLEDFIFRQKIQHFDHERVPERAVHARGAGAHGVFTSYNNWSNITAASFLNAAGKQTPVFVRFSTVAGSRGSVDSARDIHGFATRLYTDEGNFDIVGNNVPVFF 186          

HSP 2 Score: 40.4318 bits (93), Expect = 1.179e-38
Identity = 14/28 (50.00%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  532 PSFFVRDGMKFPDMVHALKPNPKSHIQE 615
            P FF++D ++FPD++HA+KP P S I +
Sbjct:  183 PVFFIQDAIQFPDLIHAVKPQPDSEIPQ 210          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.179e-38
Identity = 73/132 (55.30%), Postives = 88/132 (66.67%), Query Frame = 3
Query:  147 NAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            N  F T++ G P+ + NS + +G RGP LLED+   +K+  FD ER+PER VHARG GA G      D SN+T A FL A G +TPV VRFSTV   RGS +  RD  GFA +FYT EGNFD+VGNN PVFF
Sbjct:   50 NDTFLTSDVGGPIEDQNS-LQVGDRGPTLLEDFIFRQKIQRFDHERVPERAVHARGVGAHGVFTSYGDYSNITAASFLGAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFF 180          

HSP 2 Score: 34.6538 bits (78), Expect = 1.179e-38
Identity = 12/28 (42.86%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  532 PSFFVRDGMKFPDMVHALKPNPKSHIQE 615
            P FF++D + FPD++HA+KP   + I +
Sbjct:  177 PVFFIQDAILFPDLIHAVKPRGDNEIPQ 204          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.470e-38
Identity = 79/148 (53.38%), Postives = 104/148 (70.27%), Query Frame = 3
Query:  105 PAMDPYKF--RPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            PA D  K      ++  A   TT +G PV +  + +T GPRGP+L++D    +++A+FDRERIPERVVHA+GAGA G+ EVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF
Sbjct:    7 PASDQMKHWKEQRAAQKADVLTTGAGNPVGDKLNVITAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF 154          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATA_CANBO (Peroxisomal catalase OS=Candida boidinii GN=CTA1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.542e-38
Identity = 75/140 (53.57%), Postives = 95/140 (67.86%), Query Frame = 3
Query:  147 NAPFFTTNSGAPVWNNNSSMTIG--------PRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            N P +TT+ G PV +  S+  I         P GP+LL+D+  ++ LA+FDRERIPERVVHA+GAGA G  EVT D+S++  A FL   G +T +  RFSTV  E+GS ++ RDPRGFA KFYT EGN DLV NN P+FF
Sbjct:    3 NPPTYTTSQGCPVSDAFSTQRISGTKISIKTPVGPLLLQDFKFLDSLAHFDRERIPERVVHAKGAGAYGVFEVTEDISDICSAKFLDTVGKKTKIFTRFSTVGGEKGSSDSARDPRGFATKFYTEEGNLDLVYNNTPIFF 142          

HSP 2 Score: 33.113 bits (74), Expect = 1.542e-38
Identity = 12/29 (41.38%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  529 SPSFFVRDGMKFPDMVHALKPNPKSHIQE 615
            +P FF+RD  KFP  +H  K NP ++ ++
Sbjct:  138 TPIFFIRDPTKFPHFIHTQKRNPATNCKD 166          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATA_PICAN (Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.009e-38
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 3
Query:  147 NAPFFTTNSGAPVWNNNSSMTIG----------PRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            N P FTT+ G PV +  ++  I           P GP+LL+D+ L++ L++FDRERIPERVVHA+GAGA G  EVT D++++  A FL   G +T +  RFSTV  E+GS +T RDPRGFA KFYT +GN DLV NN P+FF
Sbjct:    3 NPPVFTTSQGCPVSDPFTTQRIPLDSTGYKYAPPIGPLLLQDFKLIDTLSHFDRERIPERVVHAKGAGAYGVFEVTDDITDVCSAKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFATKFYTEDGNLDLVYNNTPIFF 144          

HSP 2 Score: 35.039 bits (79), Expect = 2.009e-38
Identity = 12/29 (41.38%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  529 SPSFFVRDGMKFPDMVHALKPNPKSHIQE 615
            +P FF+RD +KFP  +H  K NP +++++
Sbjct:  140 TPIFFIRDPIKFPHFIHTQKRNPATNLKD 168          
BLAST of DR405027 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 2.507e-38
Identity = 74/127 (58.27%), Postives = 96/127 (75.59%), Query Frame = 3
Query:  162 TTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGAGAKGFLEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF 542
            TT  G P+ +  + MT GPRGP+L++D    +++A+FDRERIPERVVHA+GAGA G+ EVTHD++  + A      G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GN+DLVGNN P+FF
Sbjct:   28 TTGGGNPIGDKLNIMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF 154          
The following BLAST results are available for this feature:
BLAST of DR405027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_HUMAN8.617e-3957.25Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]
CATB_ASPFU9.049e-3956.06Catalase B OS=Aspergillus fumigatus GN=catB PE=1 S... [more]
CAT3_NEUCR9.050e-3957.58Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATA_PIG1.125e-3858.27Catalase OS=Sus scrofa GN=CAT PE=1 SV=4[more]
CATB_AJECA1.179e-3855.91Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATB_ASPOR1.179e-3855.30Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]
CATA_CALJA1.470e-3853.38Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATA_CANBO1.542e-3853.57Peroxisomal catalase OS=Candida boidinii GN=CTA1 P... [more]
CATA_PICAN2.009e-3852.11Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=... [more]
CATA_RAT2.507e-3858.27Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAB-PNP1240C12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405027 ID=DR405027; Name=DR405027; organism=Citrus sinensis; type=EST; length=666bp
GGGGGATCNNCGGCTTTTGGTTGCCACGCAATCCCCATCTGTCTACTCTC
TCTTTTTCTTTCTCGTAGTGTAGCTTCTCGTTCAATCTTTTTTTCTGCTT
CCCTCCCGCTATGGATCCATACAAGTTCCGCCCTGCCAGTTCTTTCAACG
CCCCCTTCTTTACCACCAATTCCGGCGCTCCGGTATGGAACAACAACTCA
TCAATGACGATTGGACCTAGAGGTCCAATCCTCCTTGAGGATTATCATCT
AGTGGAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTG
TCCATGCCAGGGGAGCCGGTGCTAAGGGTTTCCTTGAGGTCACCCATGAT
GTTTCTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGAC
GCCTGTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTG
AAACCCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAG
GGTAATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTTGTCCGTG
ATGGAATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAG
TCTCACATCCAAGAGAACTGGAGGATTTGTTGACTTCTTCTCCCATNNNC
CTGAAAGNNNGCACAT
back to top