DR404975

Overview
NameDR404975
Unique NameDR404975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CARP_NANOT (Vacuolar protease A OS=Nannizzia otae (strain CBS 113480) GN=PEP2 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.016e-33
Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            V ++NF++AQYF E+SIGTP QTF V+ DTGSSNLWVP   C  S+                 RNG S AI+YG+G++ GF SQDNV++GD+ +KNQ F EAT E  + F   +FDGILG+G+  IS+ K  P +Y M+
Sbjct:   77 VLIDNFLNAQYFSEISIGTPPQTFKVVLDTGSSNLWVPGKDCS-SIACFLHSTYDSSASSTFTRNGTSFAIRYGSGSLEGFVSQDNVQIGDMKIKNQLFAEATSEPGLAFAFGRFDGILGMGYDTISVNKITPPFYKMV 214          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.327e-33
Identity = 71/148 (47.97%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  281 SLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            SL D     V ++NF++AQYF E+S+GTP Q F V+ DTGSSNLWVP + C  S+                  NG   AI+YG+G +SGF SQD +++GDL V  QDF EAT E  + F   +FDGILGLG+  IS+ K +P +YNML
Sbjct:   66 SLNDMSRHDVLVDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDCS-SIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVSQDTLQIGDLKVVKQDFAEATNEPGLAFAFGRFDGILGLGYDTISVNKIVPPFYNML 212          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.860e-33
Identity = 83/219 (37.90%), Postives = 124/219 (56.62%), Query Frame = 2
Query:  101 VALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTV-SKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNV---------KVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            V L +  +L+ ++FA+     +RI LRK     I R + +   S E+  ++ P+ +Y++  S   ++     L N++DAQY+G++ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NG S  I YG+G++SG+ SQD V         K   + V+ Q F EATK+  I F+AAKFDGILG+G+  IS+   +PV+ N++
Sbjct:    6 VLLLILGLLASSSFAI-----IRIPLRK--FTSIRRTMTEVGGSVEDLILKGPITKYSMQSSPKTTEPVSELLKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHISVNNVLPVFDNLM 217          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.467e-32
Identity = 85/215 (39.53%), Postives = 114/215 (53.02%), Query Frame = 2
Query:  119 LILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETM-RTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV-----------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L L+    A P   LVRI L K     I R + +     E+ + + PV +Y+              L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NG S  I YG+G++SG+ SQD V V           G + V+ Q F EATK+  ITF+AAKFDGILG+ +  IS+   +PV+ N++
Sbjct:    7 LPLALCLLAAPASALVRIPLHK--FTSIRRTMSEVGGSVEDLIAKGPVSKYSQAVPAVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLM 219          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.268e-32
Identity = 66/137 (48.18%), Postives = 91/137 (66.42%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFS-VXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            L+N++DAQY+G ++IGTP Q+F V+FDTGSSNLWVPS +C F+ +                 +NG +  IQYG+G++SG+ S D V +G + V  Q F EA  E  + F+AAKFDGILGLG+  IS+   +PV+YNM
Sbjct:   60 LSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVFYNM 196          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.268e-32
Identity = 66/139 (47.48%), Postives = 88/139 (63.31%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            V L N+++AQY+ ++++GTP Q F VI DTGSSNLWVPS +C  S+                  NG   AIQYGTG++ G+ SQD + +GDL +  QDF EAT E  +TF   KFDGILGLG+  IS+ K +P +YN +
Sbjct:   81 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAI 218          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.242e-31
Identity = 82/213 (38.50%), Postives = 112/213 (52.58%), Query Frame = 2
Query:  119 LILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETM-RTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L+L     A P   LVRI L K     + R + +     E+ + + P+ +Y               L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NG S  I YG+G++SG+ SQD V V           + V+ Q F EATK+  ITF+AAKFDGILG+ +  IS+   +PV+ N++
Sbjct:    7 LLLVLGLLAAPAAALVRIPLHK--FTSVRRTMTELGGPVEDLIAKGPISKYAQGAPAVTGGPIPEMLRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLM 217          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.719e-31
Identity = 64/139 (46.04%), Postives = 89/139 (64.03%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            V + NFM+AQYF E++IGTP QTF V+ DTGSSNLWVPS++C  S+                 +NG S  I+YG+G++SGF SQD + +GD+ + +Q F EAT E  + F   +FDGILGLG+  I++    P +Y M+
Sbjct:   75 VPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCG-SIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIAVNGITPPFYKMV 212          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.342e-30
Identity = 75/189 (39.68%), Postives = 103/189 (54.50%), Query Frame = 2
Query:  158 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            GL+R+ L+++K   I +   +         +  +       S  +       L N+MD QYFGE+SIGTP Q FTVIFDTGSSNLWVPS  C  S                   NG + ++QYGTG++SG    D+V V  ++V+NQ F E+  E   TF+ A FDGILGLG+  I++G   PV+ NM+
Sbjct:   16 GLIRVPLKRQK--SIRKTPKEKGKLSHVWTQQGIDMVQYTDSCNNDQAPSEPLINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC-ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILGLGYPSIAVGGCTPVFDNMI 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.995e-30
Identity = 77/201 (38.31%), Postives = 108/201 (53.73%), Query Frame = 2
Query:  122 ILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            IL    FA    GL+R+ L+++K   I + + +         +  +       S  +       L N+MD +YFGE+S+GTP Q FTVIFDTGSSNLWVPS  C  S                   NG + ++QYGTG++SG    D V V  ++V+NQ F E+  E   TF+ A+FDGILGLG+  I++G   PV+ NM+
Sbjct:    4 ILVLLLFATLVYGLIRVPLKRQK--SIRKTLKEKGKLSHIWTQQGIDMVQYTDSCSNDQAPSEPLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC-ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILGLGYPSIAVGDCTPVFDNMI 201          
The following BLAST results are available for this feature:
BLAST of DR404975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CARP_NANOT1.016e-3349.64Vacuolar protease A OS=Nannizzia otae (strain CBS ... [more]
CARP_ASPFU1.327e-3347.97Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]
CATD_MOUSE3.860e-3337.90Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_HUMAN1.467e-3239.53Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
ASPP_AEDAE3.268e-3248.18Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CARP_YEAST4.268e-3247.48Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
CATD_CANFA1.242e-3138.50Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CARP_NEUCR4.719e-3146.04Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
CATEB_XENLA2.342e-3039.68Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
CATEA_XENLA3.995e-3038.31Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P21 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404975 ID=DR404975; Name=DR404975; organism=Citrus sinensis; type=EST; length=741bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTTGATTAAGGTCTCGTTA
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