DR404975

Overview
NameDR404975
Unique NameDR404975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.626e-23
Identity = 55/135 (40.74%), Postives = 79/135 (58.52%), Query Frame = 2
Query:  320 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            +++DA YFGE+SIGTPSQ F V+FDTGSSNLWVPS  C  S                      + +++YG+G+++GFF  D   + ++ V NQ+F  +  E    FL A+FDGI+GL +  +S+G A P    M+
Sbjct:   67 DYLDAAYFGEISIGTPSQNFLVLFDTGSSNLWVPSVYCQ-SEACTTHNRFNPSKSSTFYTYDQTFSLEYGSGSLTGFFGYDTFTIQNIEVPNQEFGLSETEPGTNFLYAEFDGIMGLAYPSLSVGDATPALQGMV 200          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23
Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 2
Query:  323 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            +MDA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  +                   NG + ++QYG+G+++GFF  D + V  + V NQ+F  +  E    F+ A+FDGI+G+ +  +++G A      ML
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-TQACTGHTRFNPSQSSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGMAYPSLAMGGATTALQGML 200          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  116 FLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKE--EETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            +++++     L    L+R+ LRK K  +   +  Q V K+  +     P ++Y+  G+ GD    +     +MDA YFGE+SIGTP Q F V+FDTGSSNLWV S  C  S                    G + ++QYGTG+++GFF  D + V  + V NQ+F  +  E    F+ A+FDGI+GL +  +S G A      ML
Sbjct:    3 WMVVALLCLPLLEASLLRVPLRKMKSIR-ETMKEQGVLKDFLKTHKYDPGQKYHF-GNFGDYSV-LYEPMAYMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGML 203          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23
Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 2
Query:  323 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            +MDA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S                   NG + ++QYG+G+++GFF  D + V  + V NQ+F  +  E    F+ A+FDGI+GL +  +S+  A      M+
Sbjct:   57 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPTLSVDGATTAMQGMV 189          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23
Identity = 73/200 (36.50%), Postives = 101/200 (50.50%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGD----LVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGK 697
            +FL+L+  A A     + RI L K+   +     G        +++  ++   + G + + D     L+++ +AQY+G V+IGTP Q F V+FDTGSSNLWVP A C F  +                   GAS  IQYGTG++ G    D V  G        KNQ    AT E  ITF+AAKFDGI G+G+  IS+ K
Sbjct:    5 VFLLLALVALA---SAIQRIKLEKRTYTREQYKFG--------SIQEHLKAKYVPGYIPNKDAFNEGLSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNK 193          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.773e-23
Identity = 70/205 (34.15%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  116 FLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKE--EETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            +++++     L    L+R+ L+K K  +   +  Q V K+  +     P ++Y+  G  GD    +     +MDA Y+GE+SIGTP Q F V+FDTGSSNLWV S  C  S                    G + ++QYGTG+++GFF  D ++V  + V NQ+F  +  E    F+ A+FDGI+GL +  +S G A      ML
Sbjct:    3 WMVVALLCLPLLEAALIRVPLKKMKSIR-ETMKEQGVLKDFLKNHKYDPGQKYHF-GKFGDYSV-LYEPMAYMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGML 203          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.773e-23
Identity = 58/136 (42.65%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            L N++D +YFG + IGTP+Q FTV+FDTGSSNLWVPS  CY S+                     + +I YGTG+++G    D VKVG +   NQ F  +  E       A FDGILGL +  IS   A PV+ N+
Sbjct:   68 LENYLDVEYFGTIGIGTPAQNFTVVFDTGSSNLWVPSVYCY-SLACMDHNLFNPQDSSTYRATSKTVSITYGTGSMTGILGYDTVKVGGISDTNQIFGLSETEPGFFLYFAPFDGILGLAYPSISSSGATPVFDNI 202          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.773e-23
Identity = 74/201 (36.82%), Postives = 105/201 (52.24%), Query Frame = 2
Query:  134 AAFALPN-DGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVA---LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            A FAL    G+VRI L K K   + R +     KE   +   ++ +    S   S++  VA   L N++D QYFG++ IGTP Q FTV+FDTGSS+LWVPS  C  SV                     S +IQYGTG++ G    D V V  +V  +Q    +T+E    F  ++FDGILGL +  ++   ++PV+ NM+
Sbjct:    9 AVFALSQASGIVRIPLHKGK--SLRRAL-----KERGLLEDFLKNHQHAVSRKHSNSREVASEFLTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLASEYSVPVFDNMM 201          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPA_CHICK (Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.621e-23
Identity = 61/137 (44.53%), Postives = 74/137 (54.01%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            + N+MDA Y+G +SIGTP Q F+VIFDTGSSNLWVPS  C  S                   N  +  I YGTG++SG    D V V  + V+NQ F  +  E    F    FDGILGL F  IS   A PV+ NM+
Sbjct:   51 MTNYMDASYYGTISIGTPQQDFSVIFDTGSSNLWVPSIYCKSSACSNHKRFDPSKSSTYVSTN-ETVYIAYGTGSMSGILGYDTVAVSSIDVQNQIFGLSETEPGSFFYYCNFDGILGLAFPSISSSGATPVFDNMM 186          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 73/190 (38.42%), Postives = 97/190 (51.05%), Query Frame = 2
Query:  161 LVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVA---LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            +V+I L KKK  + N +      K +E MRT   +YNL          +V+   L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  IS   A PV+ N+
Sbjct:    3 VVKIPLVKKKSLRQNLIEN---GKLKEFMRT--HKYNLGSKYIREAATLVSEQPLQNYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSIYC-SSEACTNHNRFNPQDSSTYEATSETLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNI 186          
The following BLAST results are available for this feature:
BLAST of DR404975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PEPC_RABIT1.626e-2340.74Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
PEPC_RHIFE2.123e-2341.04Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=... [more]
PEPC_RAT2.123e-2335.12Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PEPC_MACFU2.123e-2341.79Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]
ASP3_CAEEL2.123e-2336.50Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPC_MOUSE2.773e-2334.15Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PEPA4_MACFU2.773e-2342.65Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
CHYM_CALJA2.773e-2336.82Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
PEPA_CHICK3.621e-2344.53Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1[more]
PEPA_BOVIN1.054e-2238.42Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P21 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404975 ID=DR404975; Name=DR404975; organism=Citrus sinensis; type=EST; length=741bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTTGATTAAGGTCTCGTTA
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