DR404568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 8.051e-29 Identity = 59/86 (68.60%), Postives = 72/86 (83.72%), Query Frame = 2 Query: 38 MEIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 MEIQV GT+A K+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGA HPARV+F+V Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFSV 266
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.052e-28 Identity = 58/86 (67.44%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 38 MEIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 +EIQ+ GTI KVD+A EKQI VD VF +DEMID IGVTKG G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV+FTV Sbjct: 181 VEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 266
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.373e-28 Identity = 56/85 (65.88%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 41 EIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 EIQV G+++ KVD+A FEK + VD+VF+KDEM+D+ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TV Sbjct: 180 EIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTV 264
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.060e-28 Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 38 MEIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 +EIQV GTI KVD+A EKQ+ VD VF +DEMID IGVT+G G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV+FTV Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 266
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.996e-28 Identity = 56/86 (65.12%), Postives = 70/86 (81.40%), Query Frame = 2 Query: 38 MEIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 +EIQV G+I KV++A FEK + V VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+RVS TV Sbjct: 182 LEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTV 267
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 6.816e-28 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 38 MEIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 MEIQV G++A KV++A FEK + + + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V +TV Sbjct: 179 MEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTV 264
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 6.816e-28 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 38 MEIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 MEIQV G++A KV++A FEK + + + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V +TV Sbjct: 179 MEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTV 264
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.902e-28 Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 2 Query: 41 EIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 EIQ+ G+++ KVD+A FEK + VD+VF+++EMID+I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TV Sbjct: 181 EIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWTV 265
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.383e-27 Identity = 53/85 (62.35%), Postives = 69/85 (81.18%), Query Frame = 2 Query: 41 EIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 EIQ+ G+++ KVD+A FEK + VD+VF+++EMID++ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++V Sbjct: 180 EIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSV 264
BLAST of DR404568 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 119.398 bits (298), Expect = 5.770e-27 Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 41 EIQVXXGTIAXKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 295 EIQ+ G+I+ KVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++V Sbjct: 180 EIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSV 264 The following BLAST results are available for this feature:
BLAST of DR404568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404568 ID=DR404568; Name=DR404568; organism=Citrus sinensis; type=EST; length=296bpback to top |