DR404408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 47/154 (30.52%), Postives = 75/154 (48.70%), Query Frame = 3 Query: 303 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKLIGSPAYIE 761 R K V +G G VGK+ + + + F Y PT+ D++ V VDG L + DTAG E + +R L + F L +S+ +++++ ++ LR VPIILVG K DL D++ + QG+ L + S A++E Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPIILVGNKCDLEDER----------VVGKEQGQNLARQWNSCAFLE 145
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 36/122 (29.51%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 309 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHY-APGVPIILVGTKLDLRDDK 668 +KC+ G VGK+ +L+ + F + T+ F ++++D S + L +WDTAGQE + + YRGA + +L + + + S++ ++ W+ E+R +P + I L+G K D +D + Sbjct: 6 LKCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLS-GWMDEVRQMSSPNIVIALIGNKCDCKDKR 126
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 312 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDL 656 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA I+ + + + ++ AK W+ EL R +P + I L G K DL Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVR-AKNWVKELQRQASPNIVIALAGNKADL 138
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 285 AQMSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDK 668 A + K + +G+ +VGKT L Y ++F +V TV +F V + L +WDTAGQE Y + YRGA F+L + + ++ S+ V + W +++ Y+ +ILVG K DL D++ Sbjct: 15 ADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAV-QDWATQIKTYSWDNAQVILVGNKCDLEDER 143
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 285 AQMSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDK 668 A + K + +G+ +VGKT L Y ++F +V TV +F V + L +WDTAGQE Y + YRGA F+L + + ++ S+ V + W +++ Y+ +ILVG K DL D++ Sbjct: 15 ADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAV-QDWATQIKTYSWDNAQVILVGNKCDLEDER 143
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 285 AQMSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDK 668 A + K + +G+ +VGKT L Y ++F +V TV +F V + L +WDTAGQE Y + YRGA F+L + + ++ S+ V + W +++ Y+ +ILVG K DL D++ Sbjct: 15 ADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAV-QDWATQIKTYSWDNAQVILVGNKCDLEDER 143
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAB34_RAT (Ras-related protein Rab-34 OS=Rattus norvegicus GN=Rab34 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = 3 Query: 312 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LRHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPI 704 K + VGD +VGKTC++ + +TF +Y T+ +F V G +L LWDTAGQE + + YRGA I+ F+L AS E+ +K+W+ + L+ P V + LVG+K DL Q+ + A+ + Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEH-SKQWLADALKENDPSNVLLFLVGSKKDLSTPAQYSLMEKDALKV 186
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAB34_PIG (Ras-related protein Rab-34 OS=Sus scrofa GN=RAB34 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 312 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LRHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPI 704 K + VGD +VGKTC++ + +TF +Y T+ +F V G +L LWDTAGQE + + YRGA I+ F+L AS E+ K+W+ + L+ P V + LVG+K DL Q+ + A+ + Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEH-TKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYVLMEKDALKV 186
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAB33_CIOIN (Putative Ras-related protein Rab-33 OS=Ciona intestinalis GN=COS41.2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 3 Query: 303 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNR-LRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHY---APGVPIILVGTKLDLRDDKQ 671 R K + +GD VGKTC+ + + FP T+ +F + +DG + L LWDTAGQE + + + P YR + + + S++ + WI E Y A +P ILVG K DL+D + Sbjct: 14 RVFKIIVIGDSDVGKTCLTYRFCTGKFPEKTEATIGVDFRERTLDIDGEQIKLQLWDTAGQERFRKSMVPHYYRNVHAVVFTYDVTKGRSFQGL-PSWIEECERYSLNASEIPRILVGNKCDLKDQAE 140
BLAST of DR404408 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 40/126 (31.75%), Postives = 69/126 (54.76%), Query Frame = 3 Query: 312 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHY-APGVPIILVGTKLDLRDDKQFFID 683 K + +GD VGKTC++ + S + T+ +F+ + +DG V + +WDTAGQE + + YR A I+A+ L ++++E++ WI E+ Y A V I+L+G K DL + + + Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESI-PHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFE 143 The following BLAST results are available for this feature:
BLAST of DR404408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404408 ID=DR404408; Name=DR404408; organism=Citrus sinensis; type=EST; length=765bpback to top |