DR404400

Overview
NameDR404400
Unique NameDR404400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_XANC5 (Adenylate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=adk PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 58/160 (36.25%), Postives = 94/160 (58.75%), Query Frame = 2
Query:  182 VLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSD-SKKFLIDGFPRSEENRAAFERIMG--AEP-DIVLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            +LG PGSGKGTQ  ++   + + H+S G+LLR E+A+ S  G      +  G +V  ++ + +++  +  +D +K F++DG+PR+     A + ++G   +P D V+  D   E +V R+  R   EGR DDN ++VRKRLQV+     PVI +Y + GK
Sbjct:    5 LLGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGK 164          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_XANAC (Adenylate kinase OS=Xanthomonas axonopodis pv. citri GN=adk PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 58/160 (36.25%), Postives = 94/160 (58.75%), Query Frame = 2
Query:  182 VLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSD-SKKFLIDGFPRSEENRAAFERIMG--AEP-DIVLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            +LG PGSGKGTQ  ++   + + H+S G+LLR E+A+ S  G      +  G +V  ++ + +++  +  +D +K F++DG+PR+     A + ++G   +P D V+  D   E +V R+  R   EGR DDN ++VRKRLQV+     PVI +Y + GK
Sbjct:    5 LLGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGK 164          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_XANCB (Adenylate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=adk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.981e-23
Identity = 58/160 (36.25%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  182 VLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSD-SKKFLIDGFPRSEENRAAFERIM---GAEPDIVLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            +LG PGSGKGTQ A++   + + H+S G+LLR E+A+ S  G      +  G +V  E+ + +++  +  +D +  F++DG+PR+     A + ++   G   D V+  D   E +V R+  R   EGR DDN ++VRKRLQV+     PVI +Y + GK
Sbjct:    5 LLGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGVKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGK 164          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_XANCP (Adenylate kinase OS=Xanthomonas campestris pv. campestris GN=adk PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.505e-23
Identity = 58/160 (36.25%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  182 VLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSD-SKKFLIDGFPRSEENRAAFERIM---GAEPDIVLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            +LG PGSGKGTQ A++   + + H+S G+LLR E+A+ S  G      +  G +V  E+ + +++  +  +D +  F++DG+PR+     A + ++   G   D V+  D   E +V R+  R   EGR DDN ++VRKRLQV+     PVI +Y + GK
Sbjct:    5 LLGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGK 164          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_XANC8 (Adenylate kinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=adk PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.505e-23
Identity = 58/160 (36.25%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  182 VLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSD-SKKFLIDGFPRSEENRAAFERIM---GAEPDIVLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREGK 643
            +LG PGSGKGTQ A++   + + H+S G+LLR E+A+ S  G      +  G +V  E+ + +++  +  +D +  F++DG+PR+     A + ++   G   D V+  D   E +V R+  R   EGR DDN ++VRKRLQV+     PVI +Y + GK
Sbjct:    5 LLGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGK 164          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_STRMU (Adenylate kinase OS=Streptococcus mutans GN=adk PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.505e-23
Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 2
Query:  182 VLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSD--SKKFLIDGFPRSEENRAAFERI---MGAEPDIVLFFD----CPEEEMVNRVLNRNEG--------------------RVDDNIDTVRKRLQVFKALNLPVINYYAREG 640
            ++G PG+GKGTQ AKIV+ +GL H+S G++ R  +A+ +E GT   + I +G++VP EVT  ++++ +  SD   K FL+DG+PR+ E   A + I   +  + D V+  D    C  E +  R++NR  G                    R DD  +TV++RL V  A   P+I YY  +G
Sbjct:    5 IMGLPGAGKGTQAAKIVEKFGLAHISTGDMFRAAMANQTEMGTLAKSFIDKGELVPDEVTNGIVKERLSESDITKKGFLLDGYPRTIEQAHALDEILSKLNLKLDGVINIDVDPACLVERLSGRIINRKTGETYHKVFNPPADYNEDDYYQREDDKPETVKRRLDVNIAQGHPIIEYYRNKG 186          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_STRM5 (Adenylate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=adk PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23
Identity = 55/159 (34.59%), Postives = 94/159 (59.12%), Query Frame = 2
Query:  182 VLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSD-SKKFLIDGFPRSEENRAAFERIM---GAEPDIVLFFDCPEEEMVNRVLNR--NEGRVDDNIDTVRKRLQVFKALNLPVINYYAREG 640
            +LG PGSGKGTQ  ++ +  G+ H+S G++LR EIA+ SE G      +  G +V  ++ + +++  +  +D +K F++DG+PR+     A + ++   G   D V+  D   E +V+R+  R   +GR DD+ + VR+RLQV+     PV+++YA  G
Sbjct:    5 LLGPPGSGKGTQATRLKEKLGIAHISTGDMLRAEIAAGSELGKQAKAVMDAGNLVSDDILLGMLESRLTQADVAKGFILDGYPRNVAQANAMDGLLAKIGQPLDAVVQLDVATELLVDRIAGRAKEQGRADDSPEAVRQRLQVYNDQTAPVVDFYAARG 163          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_THET8 (Adenylate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=adk PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22
Identity = 56/157 (35.67%), Postives = 94/157 (59.87%), Query Frame = 2
Query:  185 LGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRSEENRAAFERIM---GAEPDIVLFFDCPEEEMVNRVLNRN--EGRVDDNIDTVRKRLQVFKALNLPVINYYAREG 640
            LG PG+GKGTQ +++ +  G   LS G++LR  +A  +  G  +   ++ G +VP ++ + LI++E+    +++ + DGFPR+     A +R++   G     V+  + PEEE+V R+L R   EGR DDN +TVR+RL+V++    P++ YY   G
Sbjct:   10 LGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLVPDDLILELIREEL----AERVIFDGFPRTLAQAEALDRLLSETGTRLLGVVLVEVPEEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEARG 162          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_THET2 (Adenylate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=adk PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22
Identity = 56/157 (35.67%), Postives = 94/157 (59.87%), Query Frame = 2
Query:  185 LGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRSEENRAAFERIM---GAEPDIVLFFDCPEEEMVNRVLNRN--EGRVDDNIDTVRKRLQVFKALNLPVINYYAREG 640
            LG PG+GKGTQ +++ +  G   LS G++LR  +A  +  G  +   ++ G +VP ++ + LI++E+    +++ + DGFPR+     A +R++   G     V+  + PEEE+V R+L R   EGR DDN +TVR+RL+V++    P++ YY   G
Sbjct:   10 LGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLVPDDLILELIREEL----AERVIFDGFPRTLAQAEALDRLLSETGTRLLGVVLVEVPEEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEARG 162          
BLAST of DR404400 vs. ExPASy Swiss-Prot
Match: KAD_SYNPW (Adenylate kinase OS=Synechococcus sp. (strain WH7803) GN=adk PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.449e-22
Identity = 51/155 (32.90%), Postives = 94/155 (60.65%), Query Frame = 2
Query:  185 LGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRSEENRAAFERIMG---AEPDIVLFFDCPEEEMVNRVLNRNEGRVDDNIDTVRKRLQVFKALNLPVINYYAREG 640
            +G PG+GKGTQ +++ + +GL HLS G+LLR E+++ S  G      +  G++V  ++ +++++ ++ + + + +L+DGFPR+     A E ++G      + V+  +  +E +V R+L R  GR DDN   +R RL+V++    P+I+YY   G
Sbjct:    8 IGPPGAGKGTQASRLCETHGLRHLSTGDLLRSEVSAGSALGQEAEAVMNRGELVSDDLVLAIVRSQLTALNGQGWLLDGFPRNVAQAEALEPLLGELQQSIETVVLLELDDEVLVERLLAR--GRADDNESVIRNRLEVYRQQTAPLIDYYQARG 160          
The following BLAST results are available for this feature:
BLAST of DR404400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_XANC52.920e-2336.25Adenylate kinase OS=Xanthomonas campestris pv. ves... [more]
KAD_XANAC2.920e-2336.25Adenylate kinase OS=Xanthomonas axonopodis pv. cit... [more]
KAD_XANCB4.981e-2336.25Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_XANCP6.505e-2336.25Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_XANC86.505e-2336.25Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_STRMU6.505e-2335.16Adenylate kinase OS=Streptococcus mutans GN=adk PE... [more]
KAD_STRM58.496e-2334.59Adenylate kinase OS=Stenotrophomonas maltophilia (... [more]
KAD_THET81.110e-2235.67Adenylate kinase OS=Thermus thermophilus (strain H... [more]
KAD_THET21.110e-2235.67Adenylate kinase OS=Thermus thermophilus (strain H... [more]
KAD_SYNPW1.449e-2232.90Adenylate kinase OS=Synechococcus sp. (strain WH78... [more]

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Properties
Property NameValue
Genbank descriptionCSAE-PNP1243D11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone CSAE-PNP1243D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404400 ID=DR404400; Name=DR404400; organism=Citrus sinensis; type=EST; length=761bp
GGGGAACTGGAGAGAANNNNNTACGATGTGGAGGCGCGCGGCTTCGCTTT
CTCCTTTCATCTCTTCCTCAGGATCATTGATTCGCAATCATCAGACAGCT
TACAACTTGAAGATTTGGGAATCATTTACCACGGAAATACCCACCCAGGT
AAAAGGAGGCAAGGGTCCATTCATATGTTTCGTCTTAGGTGGCCCTGGTA
GTGGAAAAGGTACGCAATGTGCAAAAATTGTGAAGAATTACGGATTGACA
CATCTAAGTGCGGGAGAGTTATTAAGGAGAGAAATAGCTTCTAACAGTGA
ATATGGCACCACAATTCTCAACACAATCAAAGAAGGAAAAATTGTCCCTT
CAGAAGTAACAGTCAGCCTGATCCAAAAGGAGATGGAATCAAGTGATAGC
AAAAAATTTCTAATTGATGGTTTTCCCCGAAGTGAGGAGAATCGTGCAGC
ATTTGAACGGATTATGGGAGCAGAACCAGATATTGTTCTTTTCTTCGATT
GCCCTGAAGAAGAGATGGTGAATCGAGTGCTGAACCGCAATGAGGGTCGA
GTTGATGATAACATTGACACAGTCCGGAAACGTCTCCAAGTGTTTAAAGC
ATTGAATCTTCCTGTTATCAATTACTATGCAAGGGAGGGGAAAGCTTTAT
ACGAAGGTTTTGCATTCNNNNCAATGCAGTGGGAACAGTAGATGAAATTT
TTGAACAAGTTCGTGCAGTTTTTGCTGCACTCAAGCTGGCGACAGAATGA
TCCTTGATTAT
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