DR404317

Overview
NameDR404317
Unique NameDR404317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5B_MOUSE (Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.183e-22
Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 1
Query:  160 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTI-PKKKEYTPPK 423
            + L EV+  N+ ++ W++I+G+VYD+T+FL +HPGG+EVLL   G DAT+ FEDVGHSP AREM+ QYY+G++  S + PK  +  P K
Sbjct:   23 YRLEEVAKRNSAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPSDLKPKGDDKDPSK 111          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5B_RAT (Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.018e-22
Identity = 48/113 (42.48%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  142 GGDAKV--FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQDKTSEFIIRLL 474
            G D  V  + L EV+  N  ++ W++I+G+VYD+T+FL +HPGG+EVLL   G DAT+ FEDVGHSP AREM+ QYY+G++  + +  K     P + +  Q   + +I+ ++
Sbjct:   15 GSDPAVTYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPNDLKPKDGDKDPSKNNSCQSSWAYWIVPIV 127          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5_RHIST (Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22
Identity = 51/122 (41.80%), Postives = 79/122 (64.75%), Query Frame = 1
Query:  151 AKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQDKTSEFIIRLLQFLVP-LAILGLAV 513
            AK+F+L EVS H    D W++I+ KVYD+T+F+ +HPGG+EVL+   GKDAT+ FED+GHS  AREM+++Y +G +D ++  K+      +     ++K        L+ ++P LAI+G  V
Sbjct:    3 AKIFSLDEVSKHKTKSDLWVVIHNKVYDITRFVVEHPGGEEVLVDEGGKDATEAFEDIGHSDEAREMLEEYLIGSLDEASRTKEYNVNVIRAGELPEEKKGS----SLRIILPALAIIGALV 120          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5B_HUMAN (Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22
Identity = 56/127 (44.09%), Postives = 79/127 (62.20%), Query Frame = 1
Query:  160 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQDKTSEFIIRLLQFLVPLAILGLAVGIRIYTKSS 540
            + L EV+  N++K+ WL+I+G+VYDVT+FL +HPGG+EVLL   G DA++ FEDVGHS  AREM+ QYY+G+I  S +   K  +  K P  N    S +   +L  ++   +LG     R YT  S
Sbjct:   23 YRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDL---KPESGSKDPSKNDTCKSCWAYWILP-IIGAVLLGFL--YRYYTSES 143          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5B_PONAB (Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = 1
Query:  160 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTI-PKKKEYTPPK 423
            + + EV+  N++K+ WL+I+G+VYDVT+FL +HPGG+EVLL   G DA++ FEDVGHS  AREM+ QYY+G+I  S + P+     P K
Sbjct:   23 YRMEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPENGSKDPSK 111          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5_ALOSE (Cytochrome b5 (Fragment) OS=Alouatta seniculus GN=CYB5A PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  154 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPK 399
            K +TL E+  HN+ K  WLI++ KVYD+TKFLE+HPGG+EVL    G DAT+DFEDVGHS  ARE+   Y +GE+     PK
Sbjct:    6 KYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATEDFEDVGHSTDARELSKTYIIGELHPDDRPK 87          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5_HUMAN (Cytochrome b5 OS=Homo sapiens GN=CYB5A PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.970e-21
Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 1
Query:  154 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPHYNQDKTSEFIIRLLQFLVP-LAILGLAVGIRIY 528
            K +TL E+  HN+ K  WLI++ KVYD+TKFLE+HPGG+EVL    G DAT++FEDVGHS  AREM   + +GE+     PK  +  PP+      D +S +      +++P ++ + +A+  R+Y
Sbjct:   10 KYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNK--PPETLITTIDSSSSW---WTNWVIPAISAVAVALMYRLY 130          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5_PIG (Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 1
Query:  154 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI---DVSTIPKKKE 408
            K +TL E+  HNN K  WLI++ KVYD+TKFLE+HPGG+EVL    G DAT++FEDVGHS  ARE+   + +GE+   D S I K  E
Sbjct:   10 KYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKIAKPSE 97          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5_BOVIN (Cytochrome b5 OS=Bos taurus GN=CYB5A PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 1
Query:  154 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI---DVSTIPKKKE 408
            K +TL E+  HNN K  WLI++ KVYD+TKFLE+HPGG+EVL    G DAT++FEDVGHS  ARE+   + +GE+   D S I K  E
Sbjct:   10 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKITKPSE 97          
BLAST of DR404317 vs. ExPASy Swiss-Prot
Match: CYB5_RABIT (Cytochrome b5 OS=Oryctolagus cuniculus GN=CYB5A PE=1 SV=4)

HSP 1 Score: 99.7525 bits (247), Expect = 1.446e-20
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 1
Query:  148 DAKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI---DVSTIPKKKE 408
            D K +TL E+  HN+ K  WLI++ KVYD+TKFLE+HPGG+EVL    G DAT++FEDVGHS  ARE+   + +GE+   D S + K  E
Sbjct:    8 DVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKLSKPME 97          
The following BLAST results are available for this feature:
BLAST of DR404317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
CYB5B_MOUSE1.183e-2251.69Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1... [more]
CYB5B_RAT2.018e-2242.48Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b... [more]
CYB5_RHIST3.442e-2241.80Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1[more]
CYB5B_HUMAN4.495e-2244.09Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1... [more]
CYB5B_PONAB1.308e-2151.69Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2... [more]
CYB5_ALOSE2.231e-2156.10Cytochrome b5 (Fragment) OS=Alouatta seniculus GN=... [more]
CYB5_HUMAN4.970e-2142.06Cytochrome b5 OS=Homo sapiens GN=CYB5A PE=1 SV=2[more]
CYB5_PIG8.478e-2154.55Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3[more]
CYB5_BOVIN1.107e-2054.55Cytochrome b5 OS=Bos taurus GN=CYB5A PE=1 SV=3[more]
CYB5_RABIT1.446e-2052.22Cytochrome b5 OS=Oryctolagus cuniculus GN=CYB5A PE... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245P04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245P04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404317 ID=DR404317; Name=DR404317; organism=Citrus sinensis; type=EST; length=680bp
GGGGAGCCCGCAGTTTTATTTTCAGTGTCCTGACTTGAGTTTCAAAGCAC
ACCCATCTCCTTATATCTCTTTTCCCTTTTATCATTACCAGCTTCGGTTA
CGTACATTGTTGAAGAGAGCTGAAGGGAGCATACAATGGGTGGTGGTGAT
GCCAAGGTCTTCACTTTGGCTGAAGTATCTGATCACAACAACATGAAAGA
TTGTTGGCTCATCATCAATGGCAAGGTGTATGACGTGACAAAATTCTTGG
AAGATCATCCTGGAGGTGATGAAGTTTTGCTGTCTGCAACAGGGAAGGAT
GCCACGGATGACTTTGAAGATGTGGGTCATAGTCCGAGTGCCAGAGAAAT
GATGGACCAGTACTACGTCGGAGAGATTGATGTATCGACCATCCCAAAGA
AAAAGGAGTATACACCTCCAAAGCAGCCTCACTACAACCAGGACAAGACA
TCAGAGTTCATCATCAGGCTTCTCCAATTCCTTGTGCCGCTAGCAATCCT
GGGGTTGGCCGTCGGCATCCGGATTTATACAAAATCATCTTAATGTTCTA
GACTATGTTCTCATAACAGACAATTTGTGTCATCTTAATGTTCTAGATTA
TGTTATCATAACAGACAATTTGTGTTTTGTTAATGAAACTTTCTTAGTTC
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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