CX070242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27 Identity = 63/190 (33.16%), Postives = 105/190 (55.26%), Query Frame = -3 Query: 228 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSK 791 M ++F L K + K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G G+ E ++WL ++ K Sbjct: 1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27 Identity = 63/190 (33.16%), Postives = 105/190 (55.26%), Query Frame = -3 Query: 228 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSK 791 M ++F L K + K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G G+ E ++WL ++ K Sbjct: 1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27 Identity = 63/190 (33.16%), Postives = 105/190 (55.26%), Query Frame = -3 Query: 228 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSK 791 M ++F L K + K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G G+ E ++WL ++ K Sbjct: 1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27 Identity = 63/190 (33.16%), Postives = 105/190 (55.26%), Query Frame = -3 Query: 228 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSK 791 M ++F L K + K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L R +A G G+ E ++WL ++ K Sbjct: 1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF2_YEAST (ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae GN=ARF2 PE=1 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27 Identity = 62/175 (35.43%), Postives = 99/175 (56.57%), Query Frame = -3 Query: 252 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWL 770 L+ +F E +L++G+D AGKTT+L KLK V + + PT+G N+ ++ N WD+GGQ +RS+W YY V+FVID+ SR +++ ++++L ++L+ A L+ ANKQDLP+A+SA E+ L L + R ++ G G+ E +EWL Sbjct: 8 LFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTI---------PTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVIDSNDRSRIGEAREVMQRMLNEDELRNAVWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQSTCATSGEGLYEGLEWL 173
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.758e-27 Identity = 68/185 (36.76%), Postives = 102/185 (55.14%), Query Frame = -3 Query: 237 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVME 791 M F ++ +F E +LILG+D AGKTT+L +L+ V V +PT+G N+ + N K WDLGGQ +R W YY AV++V+D+ R SK+ L +L E+L+ A L++ ANKQD+ A+++ E+A L L L +R S G G+ E++EWLVE ++ Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQ-VGEVVT------TIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFO (ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54) GN=ARF1 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.758e-27 Identity = 61/183 (33.33%), Postives = 102/183 (55.74%), Query Frame = -3 Query: 228 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSK 770 L+ +F K + +L++G+D AGKTT+L K+K V + + PT+G N+ +E N WD+GGQ +R +W YY ++FV+D+ R +D++ L +++ E+L+ A +L+ ANKQDLP+A+SA E+ L L + ER ++ G G+ E +WL + +K Sbjct: 8 LFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTI---------PTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWLTTHLNNAK 181
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARL2_DROME (ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster GN=Arf84F PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.296e-27 Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = -3 Query: 249 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLV 743 E +L+LG+D AGKTT+L++ G P D I PT+G NI +E + L WD+GGQ LRS W Y+E +V+V+D+A R E L+ +L+ E L GA LL+L NKQDLP A+S++E+ L L+ + + VS G + S++WL+ Sbjct: 16 EMRILLLGLDNAGKTTILKRFN-------GEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLI 173
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.296e-27 Identity = 64/184 (34.78%), Postives = 103/184 (55.98%), Query Frame = -3 Query: 225 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 770 L+ +F K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++ L+K+L ++LQ A LL+ ANKQDLP+A++ E+ L L+ L R +A G G+ E ++WL E SKR Sbjct: 8 LFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSN--ELSKR 180
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.296e-27 Identity = 64/184 (34.78%), Postives = 103/184 (55.98%), Query Frame = -3 Query: 225 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 770 L+ +F K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++ L+K+L ++LQ A LL+ ANKQDLP+A++ E+ L L+ L R +A G G+ E ++WL E SKR Sbjct: 8 LFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSN--ELSKR 180 The following BLAST results are available for this feature:
BLAST of CX070242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070242 ID=CX070242; Name=CX070242; organism=Citrus sinensis; type=EST; length=841bpback to top |