CX070242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.916e-27 Identity = 64/184 (34.78%), Postives = 104/184 (56.52%), Query Frame = -3 Query: 225 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 770 L+ IF K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++S L+K+L+ ++L+ A LL+ ANKQD+P+A+ EL L L+ L R +A G G+ + ++WL E SKR Sbjct: 8 LFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSH--ELSKR 180
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.916e-27 Identity = 64/184 (34.78%), Postives = 104/184 (56.52%), Query Frame = -3 Query: 225 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 770 L+ IF K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++S L+K+L+ ++L+ A LL+ ANKQD+P+A+ EL L L+ L R +A G G+ + ++WL E SKR Sbjct: 8 LFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSH--ELSKR 180
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.916e-27 Identity = 64/184 (34.78%), Postives = 104/184 (56.52%), Query Frame = -3 Query: 225 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 770 L+ IF K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++S L+K+L+ ++L+ A LL+ ANKQD+P+A+ EL L L+ L R +A G G+ + ++WL E SKR Sbjct: 8 LFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSH--ELSKR 180
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF4_XENLA (ADP-ribosylation factor 4 OS=Xenopus laevis GN=arf4 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.916e-27 Identity = 63/184 (34.24%), Postives = 105/184 (57.07%), Query Frame = -3 Query: 225 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 770 L+ +F K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L+K+L+ ++L+ A LL+ ANKQDLP+A++ E+ L L+ L R +A G G+ E ++WL E SKR Sbjct: 8 LFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEAAEELQKMLQEDELRDAVLLVFANKQDLPNAMAISEMTDKLTLQTLRNRTWYVQATCATQGTGLYEGLDWLSN--ELSKR 180
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARL3_HUMAN (ADP-ribosylation factor-like protein 3 OS=Homo sapiens GN=ARL3 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.114e-27 Identity = 65/173 (37.57%), Postives = 100/173 (57.80%), Query Frame = -3 Query: 225 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 743 E +L+LG+D AGKTTLL++L S E + I PT G NI ++ KL WD+GGQ +R W+ Y+E +++VID+A RFE++ L ++L E L P+LI ANKQDL A A E+A L+L + +RV ++ S G G+++ + W+ + + K+ Sbjct: 17 EVRILLLGLDNAGKTTLLKQLAS-----EDI--SHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 182
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 5.114e-27 Identity = 63/184 (34.24%), Postives = 104/184 (56.52%), Query Frame = -3 Query: 225 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 770 L+ +F K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++ L+K+L+ ++L+ A LL+ ANKQDLP+A++ E+ L L+ L R +A G G+ E ++WL E SKR Sbjct: 8 LFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSN--ELSKR 180
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.680e-27 Identity = 65/173 (37.57%), Postives = 99/173 (57.23%), Query Frame = -3 Query: 225 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 743 E +L+LG+D AGKTTLL++L S E + I PT G NI ++ KL WD+GGQ +R W Y+E +++VID+A RFE++ L ++L E L P+LI ANKQDL A A E+A L+L + +RV ++ S G G+++ + W+ + + K+ Sbjct: 17 EVRILLLGLDNAGKTTLLKQLAS-----EDI--SHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 182
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARL3_MOUSE (ADP-ribosylation factor-like protein 3 OS=Mus musculus GN=Arl3 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.680e-27 Identity = 65/173 (37.57%), Postives = 99/173 (57.23%), Query Frame = -3 Query: 225 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 743 E +L+LG+D AGKTTLL++L S E + I PT G NI ++ KL WD+GGQ +R W Y+E +++VID+A RFE++ L ++L E L P+LI ANKQDL A A E+A L+L + +RV ++ S G G+++ + W+ + + K+ Sbjct: 17 EVRILLLGLDNAGKTTLLKQLAS-----EDI--SHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 182
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARL3_DANRE (ADP-ribosylation factor-like protein 3 OS=Danio rerio GN=arl3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.680e-27 Identity = 63/173 (36.42%), Postives = 99/173 (57.23%), Query Frame = -3 Query: 225 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 743 E +L+LG+D GKTTLL++L S E + I PT G NI ++ KL WD+GGQ +R W Y+E +++VID+A RFE++ L ++L E L G P+L+ ANKQDL A A E+A L+L + +RV ++ S G G+++ + W+ + + ++ Sbjct: 17 EVRILLLGLDNGGKTTLLKQLAS-----EDIT--HITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLVFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKSVNAKRK 182
BLAST of CX070242 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.680e-27 Identity = 60/178 (33.71%), Postives = 101/178 (56.74%), Query Frame = -3 Query: 252 FYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWL 779 F L+ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L +R ++ G G+ E ++WL Sbjct: 5 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHWYIQSTCATTGEGLYEGLDWL 173 The following BLAST results are available for this feature:
BLAST of CX070242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070242 ID=CX070242; Name=CX070242; organism=Citrus sinensis; type=EST; length=841bpback to top |