CX070239

Overview
NameCX070239
Unique NameCX070239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB1_LUPLU (Leghemoglobin-1 OS=Lupinus luteus PE=1 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27
Identity = 67/151 (44.37%), Postives = 95/151 (62.91%), Query Frame = -1
Query:  168 TEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 620
            T+ Q ALV  S+     N  +   +FF  + EIAP A+ LFSFL+ S+   + N  L+ HA  VF +T E+A+QL+  G V   ++TLK LG+VH   GVV+ HF V K ++L+TIKE V + WS E+ +AW+ AYD+L   IK EMK ++
Sbjct:    5 TDVQVALVKSSFEEFNANIPKNTHRFFTLVLEIAPGAKDLFSFLKGSSEVPQNNPDLQAHAGKVFKLTYEAAIQLQVNGAVA-SDATLKSLGSVHVSKGVVDAHFPVVKEAILKTIKEVVGDKWSEELNTAWTIAYDELAIIIKKEMKDAA 154          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB4_PEA (Leghemoglobin Lb120-8 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = -1
Query:  180 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 623
            FTE+QEALV  SW + K+N     + F+  I + AP+A+ +FSFL+DS   +  + KL+ HA  VF M  +SA+QLR +G+V + + TL   GA+H + GV++ HF V K +LL+TIKEA  E WS E+ +AW  AY+ L +AIK  M
Sbjct:    3 FTEKQEALVNSSWELFKQNPS-YSVLFYTIILKKAPAAKGMFSFLKDS-AEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVLGDVTL---GAIHIQKGVIDPHFVVVKEALLDTIKEASGEKWSEELSTAWEIAYEGLASAIKKAM 145          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB2_PEA (Leghemoglobin Lb5-10 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = -1
Query:  180 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 623
            FT++QEALV  SW   K+N     + F+  I E AP+A+ LFSFL+D+   +E + KL+ HA  VF +  +SA QLR  G+V +  +TL   GA+H + GV + HF V K +LL+TIK+A    WS E+ +AW  AYD L  AIK  M
Sbjct:    3 FTDKQEALVNSSWESFKQNLSGNSILFYTIILEKAPAAKGLFSFLKDT-AGVEDSPKLQAHAEQVFGLVRDSAAQLRTKGEVVLGNATL---GAIHVQRGVTDPHFVVVKEALLQTIKKASGNNWSEELNTAWEVAYDGLATAIKKAM 146          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB3_VICFA (Leghemoglobin 49 OS=Vicia faba PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26
Identity = 67/148 (45.27%), Postives = 93/148 (62.84%), Query Frame = -1
Query:  180 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 623
            FT++QEALV  SW   K+N     + F+  I E AP+A+ +FSFL+DS   +  + KL+ HA  VF M  +SA+QL+  G+V ++  +L   GA+H + GVV+ HF V K +LL+TIKEA  + WS E+  AW  AYD L  AIK  M
Sbjct:    3 FTQQQEALVNSSWESFKQNPS-YSVLFYTIILEKAPAAKGMFSFLKDS-AGVVDSPKLQAHAEQVFGMVRDSAIQLQATGEVVLKNGSL---GAIHIQKGVVDPHFVVVKEALLKTIKEASGDKWSEELSIAWEVAYDGLATAIKKAM 145          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB2_SESRO (Leghemoglobin 2 OS=Sesbania rostrata GN=GLB2 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 66/148 (44.59%), Postives = 93/148 (62.84%), Query Frame = -1
Query:  180 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 623
            FTE+QEALV  S+   K+N     + F+  I E AP+A+ +FSFL+DS+   + N  L+ HA  VF +  +SA QLR  G V + +++   LG+VH + GV++ HF V K +LL+T+KEA    WS E+ +AW  AYD L AAIK  M
Sbjct:    3 FTEKQEALVNASYEAFKQNLPGNSVLFYSFILEKAPAAKGMFSFLKDSDGVPQNNPSLQAHAEKVFGLVRDSAAQLRATGVVVLADAS---LGSVHVQKGVLDPHFVVVKEALLKTLKEAAGATWSDEVSNAWEVAYDGLSAAIKKAM 147          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB1_MEDTR (Leghemoglobin 1 OS=Medicago truncatula GN=LB1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25
Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = -1
Query:  180 AFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 626
            +FT++QEALV  S+   K+N     + F+  I E AP+A+ LFSFL+DS   ++ + +L+ HA  VF +  +SA QLR  G V + ++ L   GA+H + GVV+ HF V K +LL+TIKEA  + WS E+ +AW  AYD L   IK  M
Sbjct:    2 SFTDKQEALVNSSYEAFKQNLSGYSVFFYTVILEKAPAAKGLFSFLKDS-AGVQDSPQLQAHAEKVFGLVRDSASQLRATGGVVLGDAAL---GAIHIQKGVVDPHFVVVKEALLKTIKEAAGDKWSEELSTAWEVAYDALATEIKKAM 146          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB3_SESRO (Leghemoglobin 3 OS=Sesbania rostrata GN=GLB3 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 65/148 (43.92%), Postives = 93/148 (62.84%), Query Frame = -1
Query:  180 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEM 623
            FTE+QEALV  S+   K+N     + F+  I E AP+A+ +FSFL+D +   + N  L+ HA  VF +  +SA QLR  G V + +++   LG+VH + GV++ HF V K +LL+T+KEA    WS E+ +AW  AYD+L AAIK  M
Sbjct:    3 FTEKQEALVNASYEAFKQNLPGNSVLFYSFILEKAPAAKGMFSFLKDFDEVPQNNPSLQAHAEKVFGLVRDSAAQLRATGVVVLADAS---LGSVHVQKGVLDPHFVVVKEALLKTLKEAGGATWSDEVSNAWEVAYDELSAAIKKAM 147          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB1_PEA (Leghemoglobin-1 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = -1
Query:  177 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMK 623
            FT++QEALV  S +  K+N     + F+  + E AP+A+ LFSFL+D+   +E + KL+ HA  VF +  +SA QLR  G+V +  +TL   GA+H + GV N HF V K +LL+TIK+A    WS E+ +AW  AYD L  AIK  MK
Sbjct:    3 FTDKQEALVNSS-SEFKQNLPGYSILFYTIVLEKAPAAKGLFSFLKDT-AGVEDSPKLQAHAEQVFGLVRDSAAQLRTKGEVVLGNATL---GAIHVQKGVTNPHFVVVKEALLQTIKKASGNNWSEELNTAWEVAYDGLATAIKKAMK 146          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB1_VICFA (Leghemoglobin-1 OS=Vicia faba PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24
Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -1
Query:  186 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKS 623
            FTE+QEALV  S  + K+N     + F+  I + AP+A+ +FSFL+DS   +  + KL  HA  VF M  +SAVQLR  G+V +      K G++H + GV++ HF V K +LL+TIKEA  + WS E+ +AW  AYD L  AIK+
Sbjct:    3 FTEKQEALVNSSSQLFKQNPSNYSVLFYTIILQKAPTAKAMFSFLKDS-AGVVDSPKLGAHAEKVFGMVRDSAVQLRATGEVVLDG----KDGSIHIQKGVLDPHFVVVKEALLKTIKEASGDKWSEELSAAWEVAYDGLATAIKA 143          
BLAST of CX070239 vs. ExPASy Swiss-Prot
Match: LGB_LOTJA (Leghemoglobin OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24
Identity = 64/149 (42.95%), Postives = 94/149 (63.09%), Query Frame = -1
Query:  180 FTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKTHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAV-PEMWSPEMKSAWSEAYDQLVAAIKSEM 623
            FT +QEALV  S+   KKN     + F+  I EIAP+A+ +FSFL++S    + + +L+ HA  VF +T ++A QL   G+VT+ +++   LGAVH +  V + HF V K +LL+T+KEAV  + WS ++ +AW  AYD L  AIK  M
Sbjct:    3 FTAQQEALVGSSYETFKKNLPTNSVLFYTVILEIAPTAKDMFSFLKESGP--KHSPQLQAHAEKVFALTRDAATQLVAKGEVTLADAS---LGAVHVQKAVTDPHFVVVKEALLQTVKEAVGADEWSDDLSTAWEGAYDGLATAIKKAM 146          
The following BLAST results are available for this feature:
BLAST of CX070239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
LGB1_LUPLU2.139e-2744.37Leghemoglobin-1 OS=Lupinus luteus PE=1 SV=3[more]
LGB4_PEA3.648e-2745.95Leghemoglobin Lb120-8 OS=Pisum sativum PE=2 SV=3[more]
LGB2_PEA1.386e-2645.27Leghemoglobin Lb5-10 OS=Pisum sativum PE=2 SV=3[more]
LGB3_VICFA4.033e-2645.27Leghemoglobin 49 OS=Vicia faba PE=2 SV=3[more]
LGB2_SESRO5.268e-2644.59Leghemoglobin 2 OS=Sesbania rostrata GN=GLB2 PE=1 ... [more]
LGB1_MEDTR1.174e-2543.62Leghemoglobin 1 OS=Medicago truncatula GN=LB1 PE=2... [more]
LGB3_SESRO1.533e-2543.92Leghemoglobin 3 OS=Sesbania rostrata GN=GLB3 PE=2 ... [more]
LGB1_PEA4.459e-2544.97Leghemoglobin-1 OS=Pisum sativum PE=1 SV=2[more]
LGB1_VICFA1.695e-2444.52Leghemoglobin-1 OS=Vicia faba PE=1 SV=2[more]
LGB_LOTJA2.213e-2442.95Leghemoglobin OS=Lotus japonicus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15F03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15F03-L5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070239 ID=CX070239; Name=CX070239; organism=Citrus sinensis; type=EST; length=689bp
TTGGAACAAACTTTTGTTATTAAGATTCAAGAGTTGAACACAAGAGATTA
TACAAAAAGGCACAAGAAACACACGTGGGTACCAATGCAAAGATTAACAA
ATAAACAATGCTCTTTTTGAAATTCTTTAATATTACAGGGGAAGAGAAAT
TTGTTCAGGAAACTCTAAGAGGAGGGCTTCATCTCCGACTTAATGGCTGC
AACCAATTGGTCGTAAGCTTCTGACCAGGCACTCTTCATTTCTGGCGACC
ACATCTCTGGTACTGCCTCTTTTATGGTTTCCAGTAGTGAAAATTTTGTG
ACCTCAAAATGCTCATTAACAACACCATATTTGAAGTGGACAGCTCCTAA
TTTTTTTAGAGTTGATTCTCTTACTGTCACTTTGCCTGCTTTCCTCAGTT
GCACTGCTGATTCACACGTCATAACAAAAACAGACATGGCATGGGTCTTG
AGCTTCTGGTTCTGCTCTAGAGGCACATTTGAGTCTCTCAAGAATGAGAA
CAGCTTTTGGGCTGATGGTGCAATCTCAAAGATCCTCAAGAAGAATTTAA
GACCCAATTCTCCAGCATTCTTCTTCATTACATTCCATGACTTGACAACT
AAAGCTTCTTGCTCTTCAGTAAAGGCTCTACCTTCGTTAATGTTGGCCAT
TGATTTCTATTTGGACACCTGAGGATTGAATGTGATCCT
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