CX070215

Overview
NameCX070215
Unique NameCX070215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BREBN (Riboflavin biosynthesis protein ribBA OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ribBA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.226e-52
Identity = 104/154 (67.53%), Postives = 123/154 (79.87%), Query Frame = -2
Query:  383 QDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 844
            + ILVRVHSECLTGDIFGS RCDCG QL  A++QIEA GRG+L+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG   D R+YGIGAQ+LRDLGV+ M+L+TNNP K  GL GYGLAV  RVPL TP    NK+YL TK+ K+GH+  L
Sbjct:  245 EPILVRVHSECLTGDIFGSYRCDCGPQLHAALEQIEANGRGILLYMR-QEGRGIGLINKLRAYKLQEEGLDTVEANEKLGFAADLRDYGIGAQILRDLGVQRMRLLTNNPRKIRGLTGYGLAVEERVPLQTPEHLHNKQYLSTKQEKLGHLLHL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_CORGL (Riboflavin biosynthesis protein ribBA OS=Corynebacterium glutamicum GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.731e-52
Identity = 94/151 (62.25%), Postives = 125/151 (82.78%), Query Frame = -2
Query:  395 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 847
            G+++LVRVHSECLTGD+FGS RCDCG QL  +++ I+ AGRGV+VY+RGHEGRGIGL  KLRAY LQD+G DTV+AN  LGLP D+RE+G  AQ+L DLGVR++ L++NNP+K VGL+G+G+++A R P+   + ++N RYL+TKR +MGH
Sbjct:  257 GENVLVRVHSECLTGDVFGSRRCDCGQQLHESLRLIQEAGRGVVVYMRGHEGRGIGLLAKLRAYQLQDEGADTVDANLALGLPADAREFGTSAQILYDLGVRSLNLISNNPAKKVGLEGHGISIASRTPIPVAVHEDNVRYLKTKRDRMGH 407          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_CORGB (Riboflavin biosynthesis protein ribBA OS=Corynebacterium glutamicum (strain R) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.731e-52
Identity = 94/151 (62.25%), Postives = 125/151 (82.78%), Query Frame = -2
Query:  395 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 847
            G+++LVRVHSECLTGD+FGS RCDCG QL  +++ I+ AGRGV+VY+RGHEGRGIGL  KLRAY LQD+G DTV+AN  LGLP D+RE+G  AQ+L DLGVR++ L++NNP+K VGL+G+G+++A R P+   + ++N RYL+TKR +MGH
Sbjct:  257 GENVLVRVHSECLTGDVFGSRRCDCGQQLHESLRLIQEAGRGVVVYMRGHEGRGIGLLAKLRAYQLQDEGADTVDANLALGLPADAREFGTSAQILYDLGVRSLNLISNNPAKKVGLEGHGISIASRTPIPVAVHEDNVRYLKTKRDRMGH 407          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLPN (Riboflavin biosynthesis protein ribBA OS=Chlamydia pneumoniae GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 97/149 (65.10%), Postives = 121/149 (81.21%), Query Frame = -2
Query:  395 DILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGH 841
            ++LVRVHSEC+TGDI GS RCDCG+QL+ AM  I   G GVLVYLRG EGRGIGLGHK+RAY LQD+G DTV+AN  +G PVDSREYGIGAQ+L DL + T+KL+T+NP KY GL+G+GL++  RVPL   I ++N++YL TK+ +MGH
Sbjct:  258 NVLVRVHSECVTGDILGSKRCDCGEQLSSAMSYIAEKGTGVLVYLRGQEGRGIGLGHKVRAYALQDNGYDTVDANLAMGFPVDSREYGIGAQILVDLKLTTIKLITHNPQKYFGLQGFGLSITERVPLPVRISEDNEQYLRTKQERMGH 406          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACHK (Riboflavin biosynthesis protein ribBA OS=Bacillus thuringiensis subsp. konkukian GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACCZ (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain ZK / E33L) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACCR (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 124/155 (80.00%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG+++++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQSLRLLTNNPRKIAGLQGYDLEVVERVPLQMPAKEENKSYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC3 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain 03BB102) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC2 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain G9842) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 124/155 (80.00%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG+++++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQSLRLLTNNPRKIAGLQGYDLEVVERVPLQMPAKEENKSYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC0 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain AH820) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
The following BLAST results are available for this feature:
BLAST of CX070215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
RIBBA_BREBN1.226e-5267.53Riboflavin biosynthesis protein ribBA OS=Brevibaci... [more]
RIBBA_CORGL2.731e-5262.25Riboflavin biosynthesis protein ribBA OS=Corynebac... [more]
RIBBA_CORGB2.731e-5262.25Riboflavin biosynthesis protein ribBA OS=Corynebac... [more]
RIBBA_CHLPN3.567e-5265.10Riboflavin biosynthesis protein ribBA OS=Chlamydia... [more]
RIBBA_BACHK3.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACCZ3.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACCR3.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC33.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC23.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC03.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15E03-J5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070215 ID=CX070215; Name=CX070215; organism=Citrus sinensis; type=EST; length=851bp
TTTTTTTTTTTTTTTTTAGGAACTTAGCATGCCTATCAAAGGACAAGCCA
AAATAATTGGATTTCTTCTGCTAATTTACACCAGGGAGAAAAAGAATGAA
TCGCTCTTCATCAGTGCAATCAACATCAACATAGAAATTGTTTGAATTGC
TGCTTATGTATGCATACAATATTGAATTTGAATCAATAAATAAATTTTGT
ATTATGAGGTGATAATGCTTCCCTTTTTGTCATGCCAGAGTCTATCTTCA
ACTCGTACTTGAATCACGTGTCCAAACCAAGTAAATTAGTGCAGCTTACG
AGTCAGATACAGTATCAGATGAAGATTTGATACTCGGCTTACCGTTAACG
TTAATGAGATTTGTTAACCGGCCATTAGATTCTAACCCATAAATGTGACC
CATTTTAGCACGTTTAGTCTCCAGATATCTCTTGTTTTCCTTTTTAATGG
GAGTTATTAGGGGAACCCTTCCTGCAACTGCCAAACCATAACCCTTGAGT
CCAACATACTTCGAAGGGTTATTTGTCATCAGCTTCATTGTTCGAACACC
AAGATCCCTTAGCATCTGTGCACCAATGCCATATTCCCGTGAGTCAACAG
GCAATCCCAATTCCTCATTTGCTTCAACTGTATCACGCCCATCGTCCTGC
AAGTTATAAGCGCGAAGCTTGTGGCCTAAACCAATGCCCCTTCCCTCATG
ACCACGGAGATAAACTAATACACCCCTGCCAGCAGCCTCAATCTGCTGCA
TTGCAAGTGCAAGCTGATCACCACAATCACATCTGGCTGATCCAAATATA
TCTCCAGTGAGACACTCTGAGTGCACTCTCACAAGAATATCTTGTCCATC
C
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