CX070215

Overview
NameCX070215
Unique NameCX070215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAN (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAH (Riboflavin biosynthesis protein ribBA OS=Bacillus thuringiensis (strain Al Hakam) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAC (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAA (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis (strain A0248) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.567e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLTVTERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_SYNWW (Riboflavin biosynthesis protein ribBA OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=ribBA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.658e-52
Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = -2
Query:  392 DGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 850
            + + ILVRVHSECLTGD+FGS RCDCG+QL  AM  I + G+GVL+Y+R  EGRGIGL +K++AY LQD+GRDTVEAN ELG P D R+YGIGAQ+L DLGVR M+LMTNNP K  GL+GYGL V  RV +  P K EN RYL TK+ KMGH+
Sbjct:  243 EDEPILVRVHSECLTGDVFGSRRCDCGEQLETAMSMIASEGKGVLLYMR-QEGRGIGLLNKIKAYKLQDNGRDTVEANLELGFPADLRDYGIGAQILVDLGVRKMRLMTNNPKKIRGLEGYGLEVVERVAIEMPHKPENTRYLRTKKEKMGHL 394          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC4 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain B4264) GN=ribBA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.658e-52
Identity = 99/155 (63.87%), Postives = 124/155 (80.00%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG+++++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQSLRLLTNNPRKIAGLQGYDLEVIERVPLQMPAKEENKSYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACCN (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ribBA PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.084e-52
Identity = 98/154 (63.64%), Postives = 122/154 (79.22%), Query Frame = -2
Query:  383 QDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 844
            + +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  GRGVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L +  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  245 EPVLVRVHSECLTGDVFGSCRCDCGPQLHAALTQIEREGRGVLLYMR-QEGRGIGLLNKLRAYKLQEEGLDTVEANEKLGFPADLRDYGIGAQILKDLGLQKLRLLTNNPRKIAGLQGYELEIVERVPLQMPTKQENKTYLQTKVTKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC1 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain ATCC 10987) GN=ribBA PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.084e-52
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = -2
Query:  383 GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL 847
            G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG++ ++L+TNNP K  GL+GY L V  RVPL  P K+ENK YL+TK  K+GH+  L
Sbjct:  244 GEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQHLRLLTNNPRKIAGLQGYDLEVIERVPLQMPAKEENKTYLQTKVNKLGHLLNL 397          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_PROVI (Riboflavin biosynthesis protein ribBA OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ribBA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.945e-52
Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = -2
Query:  392 QDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 844
            + +LVRVHS+C TGD F S RCDCG+QLA A++ IE  GRGVLVYL   EGRGIGL +KL+AYNLQDDG DTVEANEELG   D R+YGIGAQ+L+DLGVR M+LMTNNP K VGL+GYGL +  RVPL       NK YLETKR KMGH+
Sbjct:  251 EPVLVRVHSQCATGDTFASLRCDCGNQLASALRMIEKEGRGVLVYLM-QEGRGIGLINKLKAYNLQDDGFDTVEANEELGFKADLRDYGIGAQILQDLGVRKMRLMTNNPKKVVGLEGYGLEIVERVPLEIEPNAVNKTYLETKRDKMGHM 400          
BLAST of CX070215 vs. ExPASy Swiss-Prot
Match: RIBBA_GEOSW (Riboflavin biosynthesis protein ribBA OS=Geobacillus sp. (strain WCH70) GN=ribBA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.945e-52
Identity = 100/148 (67.57%), Postives = 117/148 (79.05%), Query Frame = -2
Query:  392 LVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHI 835
            LVRVHSECLTGD+FGS RCDCG QL  A++QIE  GRGVL+Y+R  EGRGIGL +KLRAY LQ+ G DTVEANE LG P D R+YGIGAQ+L+DLGV  M+L+TNNP K  GLKG+GL V  RVPL  P  KEN++YL TK  K+GH+
Sbjct:  248 LVRVHSECLTGDVFGSCRCDCGPQLHAALRQIEEEGRGVLLYMR-QEGRGIGLINKLRAYKLQEQGYDTVEANERLGFPADLRDYGIGAQILKDLGVTKMRLLTNNPRKITGLKGHGLEVVERVPLQMPANKENEKYLRTKYEKLGHM 394          
The following BLAST results are available for this feature:
BLAST of CX070215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
RIBBA_BACAN3.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAH3.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAC3.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAA3.567e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_SYNWW4.658e-5266.01Riboflavin biosynthesis protein ribBA OS=Syntropho... [more]
RIBBA_BACC44.658e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACCN6.084e-5263.64Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC16.084e-5263.87Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_PROVI7.945e-5268.21Riboflavin biosynthesis protein ribBA OS=Prostheco... [more]
RIBBA_GEOSW7.945e-5267.57Riboflavin biosynthesis protein ribBA OS=Geobacill... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15E03-J5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070215 ID=CX070215; Name=CX070215; organism=Citrus sinensis; type=EST; length=851bp
TTTTTTTTTTTTTTTTTAGGAACTTAGCATGCCTATCAAAGGACAAGCCA
AAATAATTGGATTTCTTCTGCTAATTTACACCAGGGAGAAAAAGAATGAA
TCGCTCTTCATCAGTGCAATCAACATCAACATAGAAATTGTTTGAATTGC
TGCTTATGTATGCATACAATATTGAATTTGAATCAATAAATAAATTTTGT
ATTATGAGGTGATAATGCTTCCCTTTTTGTCATGCCAGAGTCTATCTTCA
ACTCGTACTTGAATCACGTGTCCAAACCAAGTAAATTAGTGCAGCTTACG
AGTCAGATACAGTATCAGATGAAGATTTGATACTCGGCTTACCGTTAACG
TTAATGAGATTTGTTAACCGGCCATTAGATTCTAACCCATAAATGTGACC
CATTTTAGCACGTTTAGTCTCCAGATATCTCTTGTTTTCCTTTTTAATGG
GAGTTATTAGGGGAACCCTTCCTGCAACTGCCAAACCATAACCCTTGAGT
CCAACATACTTCGAAGGGTTATTTGTCATCAGCTTCATTGTTCGAACACC
AAGATCCCTTAGCATCTGTGCACCAATGCCATATTCCCGTGAGTCAACAG
GCAATCCCAATTCCTCATTTGCTTCAACTGTATCACGCCCATCGTCCTGC
AAGTTATAAGCGCGAAGCTTGTGGCCTAAACCAATGCCCCTTCCCTCATG
ACCACGGAGATAAACTAATACACCCCTGCCAGCAGCCTCAATCTGCTGCA
TTGCAAGTGCAAGCTGATCACCACAATCACATCTGGCTGATCCAAATATA
TCTCCAGTGAGACACTCTGAGTGCACTCTCACAAGAATATCTTGTCCATC
C
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