CX070169

Overview
NameCX070169
Unique NameCX070169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSM_ECOLI (Maltodextrin phosphorylase OS=Escherichia coli (strain K12) GN=malP PE=1 SV=7)

HSP 1 Score: 173.326 bits (438), Expect = 1.445e-42
Identity = 96/200 (48.00%), Postives = 135/200 (67.50%), Query Frame = -2
Query:  242 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI-AGLRKERSEGKF-VPDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 826
            +DP +GD LKV+F+PDY VS AE LIPA+++S+ ISTAG EASGT NMK A+NG + +GTLDGANVEI ++VGEEN F+FG    ++ A L K     K+   D   + V K ++SG +     + +D+++ S+ G +G    D +LV  DF +Y+E Q++VD  Y DQ+ WTR +I+NTA    FSSDR+I++Y   IW
Sbjct:  598 NDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSI-GKQG---GDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIW 793          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PYGB_SHEEP (Glycogen phosphorylase, brain form OS=Ovis aries GN=PYGB PE=2 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 4.204e-42
Identity = 96/207 (46.38%), Postives = 128/207 (61.84%), Query Frame = -2
Query:  221 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGL-RKERSEGKFVPD-ARFEEVKKFVKSGVFGSYNYD---ELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 826
            HDP +GD LKVIF+ +Y VS+AE +IPA++LSQ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E G EN F+FG R  ++  L RK  +  ++       ++    + SG F     D   +++  L  +      D F V  D+ +Y+ CQ +VD+ Y + K WT+  I N A S KFSSDRTI EYARDIW   P  L
Sbjct:  633 HDPIVGDRLKVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVEALDRKGYNAHEYYNHLPELQQAVDQINSGFFSPREPDCFKDVVNMLLNH------DRFKVFADYEAYVACQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYARDIWGAEPPAL 833          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSG_HAEIN (Glycogen phosphorylase OS=Haemophilus influenzae GN=glgP PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.172e-42
Identity = 92/207 (44.44%), Postives = 129/207 (62.32%), Query Frame = -2
Query:  221 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 826
            +D  +   LKV+F+P+Y+VS+A+L+IPA+++S+ IS AG EASGTSNMKFA+NG + +GTLDGANVEI + VGE+N F+FG    ++  LR+E  RS   +  DA+   V   +  G F       Y +L+      +G    DY+    DF SY+E Q+ VDE Y  + +W   +I N      FSSDRTI+EYA  IW + PV+L
Sbjct:  619 NDERLKGRLKVVFIPNYSVSLAQLIIPAADISEQISLAGTEASGTSNMKFALNGALTLGTLDGANVEILENVGEDNIFIFGNTVEQVEQLRREGYRSFEYYQNDAQLRTVVDQIIEGKFSPEDPQRYHQLL------QGLQYHDYYQAFADFRSYVETQKAVDEKYKQRDQWIESTIQNIVNMGFFSSDRTIKEYAERIWKVEPVQL 819          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PYGB_BOVIN (Glycogen phosphorylase, brain form OS=Bos taurus GN=PYGB PE=2 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 1.223e-41
Identity = 94/202 (46.53%), Postives = 124/202 (61.39%), Query Frame = -2
Query:  221 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 826
            HDP +GD LKVIF+ +Y VS+AE +IPA++LSQ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E G EN F+FG R  ++  L ++        D R  E+++ V     G ++  E     +        D F V  D+ +Y+ CQ +VD+ Y + K WT+  I N A S KFSSDRTI EYA DIW   P  L
Sbjct:  633 HDPIVGDRLKVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVEALDRKGYNAHEYYD-RLPELRQAVDQINGGFFSPREPDCFKDVVNMLLNHDRFKVFADYEAYVACQARVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAHDIWGAEPPAL 833          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSG_PASMU (Glycogen phosphorylase OS=Pasteurella multocida GN=glgP PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.725e-41
Identity = 92/206 (44.66%), Postives = 127/206 (61.65%), Query Frame = -2
Query:  224 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVE 826
            HD  +   LKV+F+P+Y+VS+AEL+IPA+++S+ IS AG EASGTSNMKFA+NG + IGTLDGANVEI   VG+++ F+FG    ++  LR+   R    +  D    +V   + SG F    +  Y +L+ SL+ +      DY+    DF SY++ Q+ VD  Y DQ  W   ++ N    S FSSDRTI EYA  IW I PV+
Sbjct:  619 HDERLQGRLKVVFIPNYSVSLAELIIPAADISEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEILDNVGQDHIFIFGNTVEQVESLRRHGYRPFDYYQNDEELRKVVDQIISGRFSPTDANRYHQLLQSLQYH------DYYQAFADFRSYVDMQQNVDAKYQDQNAWIDSTLQNIVNMSYFSSDRTILEYAEKIWKIKPVK 818          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSG_CHLPN (Glycogen phosphorylase OS=Chlamydia pneumoniae GN=glgP PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.071e-41
Identity = 86/197 (43.65%), Postives = 125/197 (63.45%), Query Frame = -2
Query:  236 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFV-PDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 823
            D  + D LKV+F+P+Y VS+AE +IP ++LS+ ISTAGMEASGT NMKFA+NG + IGT+DGAN+E+ + +G+EN F+FG    +I  LR+E         + +  +V   ++ G F S + D     +  +    + D F V  D  SY+   E V++ + +   WT++SI NTAG   FSSDR IQ+YARDIW++
Sbjct:  620 DSRVNDKLKVLFLPNYRVSMAEHIIPGTDLSEQISTAGMEASGTGNMKFALNGALTIGTMDGANIEMAEHIGKENMFIFGLLEEQIVQLRREYCPQTICDKNPKIRQVLDLLEQGFFNSNDKDLFKPIV--HRLLHEGDPFFVLADLESYIAAHENVNKLFKEPDSWTKISIYNTAGMGFFSSDRAIQDYARDIWHV 814          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PYG_DROME (Glycogen phosphorylase OS=Drosophila melanogaster GN=GlyP PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.353e-40
Identity = 86/201 (42.79%), Postives = 130/201 (64.68%), Query Frame = -2
Query:  230 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 826
            +DP +GD LKVIF+ +Y V++AE ++PA++LS+ ISTAG EASGT NMKF +NG + IGTLDGANVE+ +E+G +N F+FG    E+  L+K+   +   +  +   ++V   ++ G F   N +E        +   + D++ +  D+ +Y++ Q+ V + Y +Q +W  MSI N A S KFSSDRTI EYAR+IW + P
Sbjct:  633 NDPIVGDKLKVIFLENYRVTLAEKIMPAADLSEQISTAGTEASGTGNMKFQLNGALTIGTLDGANVEMAEEMGLDNIFIFGMTVDEVEALKKKGYNAYDYYNANPEVKQVIDQIQGGFFSPGNPNEFKNIA---DILLKYDHYYLLADYDAYIKAQDLVSKTYQNQAKWLEMSINNIASSGKFSSDRTIAEYAREIWGVEP 830          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSG_CHLTR (Glycogen phosphorylase OS=Chlamydia trachomatis GN=glgP PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.013e-40
Identity = 86/198 (43.43%), Postives = 123/198 (62.12%), Query Frame = -2
Query:  236 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE-RSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 826
            +DP++ D LKVIF P+Y VS+AE +IPA++LS+ ISTAGMEASGT NMKFA+NG + IGT+DGAN+E+ + +G+E+ F+FG    EI+ LRKE   +G    +   +E+   +    F   + D     +  N    + D F V  D  +Y+  Q +V   +   + WT+ SI N  G   FSSDR+I EYA +IWN+
Sbjct:  614 NDPKVNDQLKVIFWPNYRVSLAEAIIPATDLSEQISTAGMEASGTGNMKFALNGALTIGTMDGANIEMAEHIGKEHMFIFGLLEEEISELRKEYYPQGICNANPTIQEILDMIAQAKFSQEDKDLFKPIV--NRLLNEGDPFFVLADLEAYINTQNRVASLFKQPEEWTKKSIYNVGGIGFFSSDRSIAEYASNIWNV 809          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSG_CHLMU (Glycogen phosphorylase OS=Chlamydia muridarum GN=glgP PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.551e-39
Identity = 85/198 (42.93%), Postives = 122/198 (61.62%), Query Frame = -2
Query:  236 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE-RSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 826
            +DP+  DLLKV+F P+Y VS+AE +IPA++LS+ ISTAGMEASGT NMKFA+NG + IGT+DGAN+E+ + +G+E+ F+FG    EI+ LR E   +G    + + +E+   V        + D     +  N    + D F V  D  SYL+   +V   +   + WT+ SI N  G   FSSDR+I +YA +IWN+
Sbjct:  614 NDPKAKDLLKVVFWPNYRVSLAEAIIPATDLSEQISTAGMEASGTGNMKFALNGALTIGTMDGANIEMAEHIGKEHMFIFGLLEEEISALRNEYYPQGICNANPKIQEILDMVLQARLPEEDKDLFKPIV--NRLLNEGDPFFVLADLESYLDAHNRVARLFTQPEEWTKKSIYNVGGIGFFSSDRSITDYASNIWNV 809          
BLAST of CX070169 vs. ExPASy Swiss-Prot
Match: PHSG_BACSU (Glycogen phosphorylase OS=Bacillus subtilis GN=glgP PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.693e-39
Identity = 86/205 (41.95%), Postives = 127/205 (61.95%), Query Frame = -2
Query:  227 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE---RSEGKFVPDARFEEVKKFVKSGVF--GSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV 826
            +DP +  L+KV+F+ +Y VS+AE + PAS++S+ ISTA  EASGT NMKF MNG + IGT DGAN+EI + VG +  + FG +A E+   ++    RS   +  D R  +V   + +G F   +  ++ +  SL         D + V KDF SY + QE++   Y ++++W+  SI+N A S  FSSDRTI+EYA+DIW I P+
Sbjct:  598 YDPAVKQLIKVVFLENYRVSMAERIFPASDVSEQISTASKEASGTGNMKFMMNGALTIGTHDGANIEILERVGPDCIYTFGLKADEVLSYQENGGYRSREYYQHDRRIRQVADQLINGFFEGEADEFESIFDSL-----LPHNDEYFVLKDFSSYADAQERIQADYRERRKWSEHSIVNIAHSGYFSSDRTIREYAKDIWGIKPM 797          
The following BLAST results are available for this feature:
BLAST of CX070169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PHSM_ECOLI1.445e-4248.00Maltodextrin phosphorylase OS=Escherichia coli (st... [more]
PYGB_SHEEP4.204e-4246.38Glycogen phosphorylase, brain form OS=Ovis aries G... [more]
PHSG_HAEIN7.172e-4244.44Glycogen phosphorylase OS=Haemophilus influenzae G... [more]
PYGB_BOVIN1.223e-4146.53Glycogen phosphorylase, brain form OS=Bos taurus G... [more]
PHSG_PASMU2.725e-4144.66Glycogen phosphorylase OS=Pasteurella multocida GN... [more]
PHSG_CHLPN6.071e-4143.65Glycogen phosphorylase OS=Chlamydia pneumoniae GN=... [more]
PYG_DROME1.353e-4042.79Glycogen phosphorylase OS=Drosophila melanogaster ... [more]
PHSG_CHLTR3.013e-4043.43Glycogen phosphorylase OS=Chlamydia trachomatis GN... [more]
PHSG_CHLMU2.551e-3942.93Glycogen phosphorylase OS=Chlamydia muridarum GN=g... [more]
PHSG_BACSU9.693e-3941.95Glycogen phosphorylase OS=Bacillus subtilis GN=glg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15B11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15B11-D21-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070169 ID=CX070169; Name=CX070169; organism=Citrus sinensis; type=EST; length=827bp
TTTTTTGAAACAAGATTTTCAGTTCTTATTTATTTTATTCTATTAACTAC
GTAATACAGTAATTATATTCATCGAAGATACATTTATTCACGGCTTTCAT
CCAGGGATCATAAGCATTTTGCTTTACATAGAACATATATCAACAGGATG
CCATAAGTGATCAGAAAAGCCTGTGGTAGTCCCAACTCAAGTACTAGGAA
CAAGCATTACACAGTCACGGCAATTCGACGGGTATTATGTTCCATATGTC
TCGGGCATATTCCTGAATCGTTCTGTCGCTGCTGAACTTGGATGAACCCG
CTGTGTTCATGATCGACATTCTCGTCCATCTCTTTTGATCGCAATATGCT
TCATCAACCTTCTCTTGGCATTCCAAGTAACTAGGGAAATCTTTGCCCAC
GAGGAAATAATCTGCCTGGCCAAAACCTTCATTTCCTTCCAGTGATCCCA
TTAGTTCATCATAGTTGTAAGAACCAAAAACACCAGATTTGACAAATTTC
TTCACTTCTTCAAAACGTGCGTCGGGAACAAATTTCCCCTCAGATCTTTC
TTTTCTCAATCCTGCAATCTCGTGGGCTCTGGCACCAAATAGGAAAAAGT
TCTCCTCTCCAACCTCTTGCCGTATTTCAACATTGGCACCATCCAAGGTT
CCAATCAAAATGCAACCATTCATTGCAAATTTCATGTTACTGGTACCACT
AGCCTCCATCCCGGCAGTACTGATGTGTTGTGAGAGCTCACTTGCAGGTA
TAAGCAATTCAGCCACACTTACATTGTAATCAGGGACAAAAATAACCTTC
AATAAGTCACCTATTTCAGGATCATGA
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