CX070047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 286 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVF 657 +++ YP C +P G H D + +L QD V GL++ + +W + P ++V+N+GD ++N +Y+S LHR + + R S+A F P D V+ P LV+ + +VYP F + Sbjct: 215 RLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDH--HPRVYPDFTW 335
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13 Identity = 45/160 (28.12%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 94 HLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 573 H+ +S ++ I D ++ R ++ + E+ +VA + +F +++ Y P + GL HTD + +L QD ++ GL+L + QW+ V P ++ +N+GD + ++NG Y+SV HRVI+ RMSIA F P Sbjct: 136 HIILSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENS---FLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCP 291
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.854e-13 Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 331 GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 666 G HTD +I L + ++ GLQ+ +KD WVDV P S + +GD L+V+TNG++KSV HRV+ T+ +R+S+ F P I P LV K+ + +Y +F + Y Sbjct: 198 GFGEHTDPQ-LISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQ--DDCLYNEFTWSQY 307
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11 Identity = 39/115 (33.91%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 271 PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLK--DDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPAL 609 PT ++ YP P G++ HTDA + L+ QD+ V GL++L + ++ V P +++ NLGD + ++TN +YKS +HRV + +R +I F D V+ P P L Sbjct: 255 PTTSIRLLRYPSSPNR---LGVQEHTDADALTLMSQDN-VKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRVCNNSGSDRYTIPFFLQGNIDYVVAPLPGL 365 The following BLAST results are available for this feature:
BLAST of CX070047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070047 ID=CX070047; Name=CX070047; organism=Citrus sinensis; type=EST; length=780bpback to top |