CX069918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA4_HUMAN (Proteasome subunit alpha type-4 OS=Homo sapiens GN=PSMA4 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.000e-50 Identity = 101/196 (51.53%), Postives = 136/196 (69.39%), Query Frame = -1 Query: 183 KLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAE 767 KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+ KH + AE Sbjct: 54 KLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAE 248
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA4_BOVIN (Proteasome subunit alpha type-4 OS=Bos taurus GN=PSMA4 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.000e-50 Identity = 101/196 (51.53%), Postives = 136/196 (69.39%), Query Frame = -1 Query: 183 KLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAE 767 KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+ KH + AE Sbjct: 54 KLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAE 248
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA4_RAT (Proteasome subunit alpha type-4 OS=Rattus norvegicus GN=Psma4 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.307e-50 Identity = 101/196 (51.53%), Postives = 136/196 (69.39%), Query Frame = -1 Query: 183 KLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAE 767 KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+ KH + AE Sbjct: 54 KLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAE 248
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.229e-50 Identity = 100/197 (50.76%), Postives = 137/197 (69.54%), Query Frame = -1 Query: 195 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFL-MPSGKVKYQVCSPEALSKLLVKHGVTQ 782 KKVTSKLL+ S EK+Y I D++ CAVAG+ +DANILIN AR Q+Y + E MP EQLV+ +CD KQGYTQ+GGLRPFGVSFL+AGWD G+QL+ S+PSGNYG W+ QS+++Q+YKDDI+ +EA +A+K LSKT+DS SLT +K+E A + K+ ++ + ++++L K+ TQ Sbjct: 49 KKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATITKDTTKNKMVCKIWKSDEINEVLNKYQETQ 245
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA4_MACFA (Proteasome subunit alpha type-4 OS=Macaca fascicularis GN=PSMA4 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.229e-50 Identity = 100/196 (51.02%), Postives = 136/196 (69.39%), Query Frame = -1 Query: 183 KLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD-DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAE 767 KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDP+GNYGGWK S+LKQDYK+ +++ + A+ LA+KVL+KTMD + L+++K+E+A +GK +V + + +L+ KH + AE Sbjct: 54 KLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPNGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAE 248
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA4_DROME (Proteasome subunit alpha type-4 OS=Drosophila melanogaster GN=Pros29 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.145e-46 Identity = 95/203 (46.80%), Postives = 132/203 (65.02%), Query Frame = -1 Query: 177 TSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD----DISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAETS 773 T+KLL ++ +EK+Y+++D++ C+VAGI SDAN+L + R+ AQRY ++Y E +P EQLV LCD KQ YTQ+GG RPFGVS L+ GWD YG+QLY SDPSGNYGGWK S+LKQ+ D ++ +A LA+KVLS T+D+T LT +K+E+A + + K Y V + KL+ K+ Q AE + Sbjct: 52 TNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAIKVLSMTLDTTKLTPEKVEMATLQRV-DNKTVYSVLEKPDVEKLIEKYTKVQAEAEAA 253
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.495e-46 Identity = 100/202 (49.50%), Postives = 131/202 (64.85%), Query Frame = -1 Query: 177 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAETS 782 +K KLL S TEK+Y++ D+++C VAGI +DANILIN R A Y +Y E MPVEQLVQ+LC+ KQ YTQ GG RPFGVS L+ GWDK+YG+QLY SDPSGNY GWK ++LKQ+YK + EEA QLA+KVL KT+D L S+K+E+A V GK + + + + L+ +H + AET+ Sbjct: 49 RKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSP-NLEEAKQLAIKVLWKTLD-VKLASEKVEMA-VLTRRDGKTVLEELTTKEVDALIAEHEKKEKEAETA 247
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.645e-35 Identity = 74/171 (43.27%), Postives = 106/171 (61.99%), Query Frame = -1 Query: 282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD----DISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782 ++ KL+ TS ++ +++++AC G +D N+L+N R+ AQ+Y + + E +P EQLV +LCD KQ YTQ+GG RPFGVSFL+ GWD +GFQLY SDPSGNY GWK +L+++ S EEA +A+KV+ T+ SLT +KLE+A V Sbjct: 48 ERSVDKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGRDSLTPEKLEIAFV 218
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.476e-33 Identity = 72/167 (43.11%), Postives = 113/167 (67.66%), Query Frame = -1 Query: 282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782 K++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ Y Y EP PV +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ Y+DD++ E+A++LAL L+KTM++ S +D +E+A + Sbjct: 54 KRITSRLIEPD-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAG--INDRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENPS--ADNIEVAVI 215
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.223e-33 Identity = 77/189 (40.74%), Postives = 118/189 (62.43%), Query Frame = -1 Query: 216 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 782 K++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ YKDD+S EEA++LA+ L+KTM+ S E EV ++ K++ S E + K L Sbjct: 54 KRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG--VNEKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTMEKPS-----AENIEVAIITVKDKKFRKLSREEIEKYL 234 The following BLAST results are available for this feature:
BLAST of CX069918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069918 ID=CX069918; Name=CX069918; organism=Citrus sinensis; type=EST; length=782bpback to top |