CX069918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.530e-26 Identity = 69/193 (35.75%), Postives = 114/193 (59.07%), Query Frame = -1 Query: 210 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKV--KYQVCSPEALSKLLVK 782 +++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y ++++ E ++LAL LSKT + L + +++A + SGK+ K V E + K + K Sbjct: 54 RRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELALYALSKTTE--ELKPENIDMA--IVKDSGKLVEKISVDEIEKIVKAVYK 240
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.455e-25 Identity = 63/167 (37.72%), Postives = 103/167 (61.68%), Query Frame = -1 Query: 282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782 +++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ ARV+AQ +Y E + VE L + +CD KQ YT GG RPFG++ L G D+ + +L+ +DPSG +K IL++ Y +++S E ++LA+ LSKT + L + +++A V Sbjct: 54 RRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYALSKTTE--ELKPENIDMAIV 216
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.455e-25 Identity = 69/193 (35.75%), Postives = 113/193 (58.55%), Query Frame = -1 Query: 210 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKV--KYQVCSPEALSKLLVK 782 +++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y +++ E ++LAL LSKT + L + +++A + SGK+ K V E + K + K Sbjct: 54 RRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTE--ELKPENIDMA--IVKDSGKLVEKISVDEIEKIVKAVYK 240
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.481e-25 Identity = 65/189 (34.39%), Postives = 112/189 (59.26%), Query Frame = -1 Query: 216 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 782 KKV S+L++ + S EK+ IDD+VA +G+++DA +L++ AR+ AQ+ Y + +E LV+ + D Q YTQ+GG+RP+GVS +FAG D+ G +L+ DP+G +K S L+++YK+++ +EAV L +K L +++ ++L+ E+ + G KY++ E + K L Sbjct: 52 KKVRSRLIEQN-SIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEE----GEELKAPEIASITVGN-KYRIYDQEEVKKFL 233
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.528e-25 Identity = 63/161 (39.13%), Postives = 95/161 (59.01%), Query Frame = -1 Query: 282 EKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVL----SKTMD----STSLTSDKLELAEV 740 +K+YKIDDH+ A AG+ D ILI+ ARV R+ Y EP PVE + + + D KQ YTQ GG+RPFGV+ +FAG + + ++Y +DP G Y +K + ++ Y+ D+S EEA +LALK+L KT++ + + D++ELA + Sbjct: 69 DKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYI 229
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.429e-25 Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = -1 Query: 291 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLEL 782 +K +L S K+ I H+ +G+ D +L+ AR AQ+Y YQEP+P QLVQ + Q YTQ GG+RPFGVS L AGWD+ + L+ SDPSG Y WK ++ L++ Y +D+ E+A+ A+ L ++ + +T D +E+ Sbjct: 49 EKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEG-QMTEDNIEV 210
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.231e-24 Identity = 66/200 (33.00%), Postives = 114/200 (57.00%), Query Frame = -1 Query: 195 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEA----LSKLLVKHGVTQ 782 K++TS+L++ S EK+++ID+H+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YTQ+GG+RP+G + L AG D N +L+ +DPSG +K + + DY++D++ + A+ L + L K + + LE+ V L K++ PE + ++L KH T+ Sbjct: 51 KRITSRLVEAE-SIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAEG-KFDAGTLEVGVVSLEDK---KFRKLGPEEVENYVQQILEKHKGTE 244
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.608e-24 Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDS 782 KK T KL Q S S K+ +DDH+A A AG+ +DA +L+N AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG + WK + L+++YK + S +E V+LA++ L + ++S Sbjct: 48 KKSTPKL-QDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYK-ETSGQETVKLAIRALLEVVES 200
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.743e-24 Identity = 65/200 (32.50%), Postives = 113/200 (56.50%), Query Frame = -1 Query: 195 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEA----LSKLLVKHGVTQ 782 K++TS+L++ S EK+++IDDH+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YTQ+GG+RP+G + L AG D N +L+ +DPSG +K + + +Y+ D++ + A+ L + L + + + LE+ V L K++ PE + ++L KH T+ Sbjct: 53 KRITSRLVEAE-SIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNLP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDALYRAAEG-KFDASTLEVGIVSLQDK---KFRKLVPEEVENYVQQILEKHKETE 246
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.743e-24 Identity = 63/170 (37.06%), Postives = 101/170 (59.41%), Query Frame = -1 Query: 282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782 K++TS LL+ S S EK+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD + + RPFGVS L AG D+N G LY +DPSG + S L++ + D+S +EA +A+ +L + M+ +T + +++A+V Sbjct: 52 KRITSPLLEPS-SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEE-KVTPNNVDIAKV 218 The following BLAST results are available for this feature:
BLAST of CX069918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069918 ID=CX069918; Name=CX069918; organism=Citrus sinensis; type=EST; length=782bpback to top |