CX069918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22 Identity = 57/156 (36.54%), Postives = 89/156 (57.05%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD--ISREEAVQLALKVLSKTMDS 782 KK +KL Q + K+ +D+HV A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y D+ S +A++LA+K L + + S Sbjct: 49 KKSVAKL-QEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQS 203
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22 Identity = 64/194 (32.99%), Postives = 107/194 (55.15%), Query Frame = -1 Query: 216 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-----LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 782 K+V S L+ S S K+ +ID H+ ++G+++DA IL++ ARV+AQ + + Y EPM VE + CD + + GG RPFGVS L AG D+N G QL+ +DPSG Y + Q++ + Y +++ EEA L +++L + M+ LT +E+A ++P + Q+ E + +++ Sbjct: 52 KRVPSTLVDPS-SVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDEN-GPQLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQVMEE-KLTKTSVEIA---IVPVSTGRLQIYDQEQIQRII 239
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.471e-22 Identity = 56/156 (35.90%), Postives = 90/156 (57.69%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDI--SREEAVQLALKVLSKTMDS 782 KK +KL Q + K+ +DDHV A AG+ +DA ++I+ ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y +D + +EA++LA+K L + + S Sbjct: 49 KKSVAKL-QDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQS 203
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.757e-22 Identity = 61/160 (38.12%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 282 LQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 761 L TS EK++K DDH+ A AG ++DA LI+ AR Q+Q Y EP+ +E L + + D Q YTQ GG RPFGV+ L G + N +LY +DPSG WK Q L+++++DD++ +E ++LAL+ ++ T D D +++A V Sbjct: 60 LMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVE-NGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELALEAIASTSDE-GTAPDGVDVATV 217
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.274e-21 Identity = 54/148 (36.49%), Postives = 89/148 (60.14%), Query Frame = -1 Query: 339 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVL 782 K+V+SKLL++S S EK++KID+H+ A +G++ DA L++ AR++ Q +Y E + VE L + LCD Q TQ+GG+RP+G + L AG +L+ +DPSG +K + +++Y D++ ++A+ L LK L Sbjct: 53 KRVSSKLLESS-SIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVSDGES-RLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLALKDAILLGLKAL 198
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.664e-21 Identity = 60/189 (31.75%), Postives = 103/189 (54.50%), Query Frame = -1 Query: 216 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 782 KK+ S +L TS +K+ + ++ +G+ D +L+ +R QAQ+Y Y+E +PV QLV+ Q +TQ GG+RPFGVS L AG+D N G QLY DPSG+Y WK ++ L++ Y +D+ ++A+ A+ L + + ++++ +E+ + +++V SP + L Sbjct: 50 KKLPS-ILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEG-QISANNIEIGII----RSDREFKVLSPAEIKDFL 231
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.664e-21 Identity = 60/189 (31.75%), Postives = 103/189 (54.50%), Query Frame = -1 Query: 216 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 782 KK+ S +L TS +K+ + ++ +G+ D +L+ +R QAQ+Y Y+E +PV QLV+ Q +TQ GG+RPFGVS L AG+D N G QLY DPSG+Y WK ++ L++ Y +D+ ++A+ A+ L + + ++++ +E+ + +++V SP + L Sbjct: 50 KKLPS-ILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEG-QISANNIEIGII----RSDREFKVLSPAEIKDFL 231
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.174e-21 Identity = 59/167 (35.33%), Postives = 93/167 (55.69%), Query Frame = -1 Query: 282 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 782 K+VTS+LL+ S EK++KID H+ A +G++ DA L++ ARV++Q +Y EP+ VE L + LCD Q YTQFGG RP+G + L AG +L+ +DPSG +K + +Y++D A++L +K L + T KL+++ + Sbjct: 53 KRVTSRLLEP-VSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVSDGEA-RLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFSGAIRLGIKALH------AATEGKLDVSAI 211
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.839e-21 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDS 782 KK T KL Q S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++ + VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK + L+++YK + S +E ++LA++ L + ++S Sbjct: 48 KKSTPKL-QDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGKETIKLAIRALLEVVES 200
BLAST of CX069918 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.839e-21 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = -1 Query: 321 KKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDS 782 KK T KL Q S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++ + VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK + L+++YK + S +E ++LA++ L + ++S Sbjct: 48 KKSTPKL-QDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGKETIKLAIRALLEVVES 200 The following BLAST results are available for this feature:
BLAST of CX069918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069918 ID=CX069918; Name=CX069918; organism=Citrus sinensis; type=EST; length=782bpback to top |