CX069914

Overview
NameCX069914
Unique NameCX069914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_XANC8 (Phosphoglycerate kinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=pgk PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.765e-52
Identity = 106/234 (45.30%), Postives = 149/234 (63.68%), Query Frame = 2
Query:    2 FLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 703
            F   +  G L+  ELD L  A+ NP KP  AIV GSKVSTK+ ++ +L+ KVD L++GGG+  TF  A GH VG SL E D +  A  ++  AK++G  + LPTDVV+A +F  DA + V     +    + LD+GP     ++E +    T++WNGP+GVFEF+ F+ GTE +A+ +A        +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL+
Sbjct:  157 FAPVAAGGPLLMAELDALAKALDNPAKPLLAIVAGSKVSTKLELLSNLVNKVDQLIVGGGIANTFIAAAGHDVGKSLSEPDLIPTANQIVADAKARGAEIPLPTDVVVAKQFLPDAEASVKSLDQVDADDLILDIGPQTAAHYAELIANAGTVVWNGPVGVFEFEPFSHGTETLARAIA---ASKAFSIAGGGDTLAAVDKYAIAKDVTYISTGGGAFLEFLEGKTLPAVAALE 387          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_RUTMC (Phosphoglycerate kinase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=pgk PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.765e-52
Identity = 108/228 (47.37%), Postives = 154/228 (67.54%), Query Frame = 2
Query:   20 AGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 703
            +G L+  ELD L   + NPK+P  AIVGGSKVSTK+ V+ESL + VD L++GGG+  TF  AQG +VG SL E D + +A  LME  +     + +PTDVV   +F+  A ++   +T + D  M  D+GP++IK  ++ ++   TI+WNGP+GVFEF++FA+GT+ + K +AE       +I GGGD++AAV+K G+ DK+++ISTGGGA LE LEGK LP V  L+
Sbjct:  163 SGPLLSGELDALGKVLDNPKRPMVAIVGGSKVSTKLTVLESLSKIVDQLVVGGGIANTFIAAQGFNVGKSLCEHDLIPMAKKLMEDCE-----IPVPTDVVCGKEFSETAEAQTKASTEVSDDDMIFDIGPESIKQLAKIMENAGTIVWNGPVGVFEFEQFASGTKTLGKAIAE---SDAFSIAGGGDTLAAVDKYGIEDKINYISTGGGAFLEFLEGKILPAVEILE 382          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_XANFL (Phosphoglycerate kinase OS=Xanthobacter flavus GN=pgk PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.836e-52
Identity = 103/231 (44.59%), Postives = 152/231 (65.80%), Query Frame = 2
Query:   11 PSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 700
            P+ AG  M+ E++ L  A+  P++P  A+VGGSKVS+K+ ++ +L++KVDIL++GGGM  TF  A G  VG SL E D  + A  +++KA++ G  ++LP D V+A +F A+A  +V     + D  M LD GP+ +    + LD  KT++WNGP G FE   F A T A+A+ + +L+ KG + ++ GGGD+VAA+   G A++ S++ST GGA LE LEGK LPGV AL
Sbjct:  165 PAYAGRSMESEIEALTKALEAPQRPVLAVVGGSKVSSKLELLGNLVKKVDILVIGGGMANTFLAALGKKVGKSLCEHDLANTARDILKKAEAAGCEIVLPVDAVVATEFKANAAHRVTSVDDVKDDEMMLDAGPETVGIVKQKLDGAKTVVWNGPFGAFEMTPFDAATVAVARYVGDLTHKGRLLSVAGGGDTVAALNHAGTAERFSYVSTAGGAFLEWLEGKALPGVEAL 395          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_THIDA (Phosphoglycerate kinase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=pgk PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.836e-52
Identity = 105/235 (44.68%), Postives = 153/235 (65.11%), Query Frame = 2
Query:    2 FLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 706
            F   + AG L+ +ELD L  A++NP +P  AIVGGSKVSTK+ V+E+L EKVD L++GGG+  TF  A G +VG SL E D +  A +L+EK  ++G S+ +  DVV   KF A+  + +  A  + D  M  D+GP + +  ++ +    TI+WNGP+GVFEFD+F  GT+ ++  +A   G    ++ GGGD++AA++K  + DK+S+IST GGA LE LEGK LP V  L++
Sbjct:  158 FAPTAAAGILLTEELDALAKALANPARPMVAIVGGSKVSTKLTVLEALSEKVDQLVVGGGIANTFLAAMGKNVGKSLCEHDLIPTAKTLIEKMAARGASIPIAVDVVCGKKFDANEPAVLKSADEVADDDMIFDIGPKSAQELADIIAKAGTIVWNGPVGVFEFDQFGEGTKTVSMAIANAPG---FSLAGGGDTIAAIQKYDIYDKVSYISTAGGAFLEYLEGKVLPAVAILEE 389          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_PSEAE (Phosphoglycerate kinase OS=Pseudomonas aeruginosa GN=pgk PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.836e-52
Identity = 111/234 (47.44%), Postives = 150/234 (64.10%), Query Frame = 2
Query:    2 FLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 703
            F K + AG L+  ELD L  A+ NP +P AAIV GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D ++ A ++  K K     + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  157 FAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGHKVGKSLYEADLVETAKAIAAKVK-----VPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_PSEAB (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pgk PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.836e-52
Identity = 111/234 (47.44%), Postives = 150/234 (64.10%), Query Frame = 2
Query:    2 FLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 703
            F K + AG L+  ELD L  A+ NP +P AAIV GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D ++ A ++  K K     + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  157 FAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGHKVGKSLYEADLVETAKAIAAKVK-----VPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_PSEA8 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=pgk PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.836e-52
Identity = 111/234 (47.44%), Postives = 150/234 (64.10%), Query Frame = 2
Query:    2 FLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 703
            F K + AG L+  ELD L  A+ NP +P AAIV GSKVSTK+ V+ SL    D L++GGG+  TF  A GH VG SL E D ++ A ++  K K     + LP DVV+A +FA  A + V     + D  M LD+GP     F+E L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  157 FAKVAAAGPLLAAELDALGKALDNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIANTFLAAAGHKVGKSLYEADLVETAKAIAAKVK-----VPLPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_ZYMMO (Phosphoglycerate kinase OS=Zymomonas mobilis GN=pgk PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.507e-51
Identity = 106/232 (45.69%), Postives = 149/232 (64.22%), Query Frame = 2
Query:   11 PSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 703
            P+ AG  MQKEL+ L  A+  P  P AA+VGG+KVSTK+ V+ +L+ KVD L++GGGM  TF  AQG  VG SL E +  D    +   A+  G  + LP+DVV+A +F A+   + +P + +    M LDVGP A+ + +E L  +KT++WNGP+G FE + F   T A+AK+ A L+  G + ++ GGGD+VAA+   G+A   S +ST GGA LE +EGK LPGV AL+
Sbjct:  165 PAFAGRAMQKELEALEAALGKPTHPVAAVVGGAKVSTKLDVLTNLVSKVDHLIIGGGMANTFLAAQGVDVGKSLCEHELKDTVKGIFAAAEKTGCKIHLPSDVVVAKEFKANPPIRTIPVSDVAADEMILDVGPKAVAALTEVLKASKTLVWNGPLGAFEIEPFDKATVALAKEAAALTKAGSLISVAGGGDTVAALNHAGVAKDFSFVSTAGGAFLEWMEGKELPGVKALE 396          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_XYLFT (Phosphoglycerate kinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=pgk PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.507e-51
Identity = 104/229 (45.41%), Postives = 151/229 (65.94%), Query Frame = 2
Query:   14 SVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 700
            +  G L+  ELD L   + +P KP  AIVGGSKVSTK+ ++ +L+  V+ L+ GGG+  TF  A G+ +G SL E D ++ A  ++  AK++G  + LPTDVV+A +F     + V    AI    + LD+GP   + ++  ++T  T++WNGP+GVFEFD F+ GTE +A+ +A  S     +I GGGD++AA++K G+AD++S+ISTGGGA LE LEGKTLP V AL
Sbjct:  161 AAGGPLLMAELDALSRGLKHPVKPLLAIVGGSKVSTKLELLSNLVNNVEQLITGGGIANTFLAAAGYPIGKSLYEADLIETAREIITVAKARGAEIPLPTDVVVAKQFLPGVTATVKTVDAIVADDLILDIGPQTARHYAALIETAATVVWNGPVGVFEFDAFSKGTEVLARAVAASS---AFSIAGGGDTLAAIDKYGVADQISYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CX069914 vs. ExPASy Swiss-Prot
Match: PGK_TOLAT (Phosphoglycerate kinase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=pgk PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.507e-51
Identity = 109/235 (46.38%), Postives = 154/235 (65.53%), Query Frame = 2
Query:    2 FLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 706
            F   + AG L+  ELD L  A+  P++P  AIVGGSKVSTK+ V+ESL +  D L++GGG+  TF  A GH+VG SL E D +D A  L  +      ++ + TDVV+  +F+    + +   + + D  M  D+GPD+ K+ ++ +   KTI+WNGP+GVFEFD+FA GTE IAK +AE       +I GGGD++AA++K G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  157 FAPVACAGPLLAGELDALGKAMLKPERPMVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAAGHNVGKSLCEHDLIDTAKKLAAE-----TNIPVTTDVVVGKEFSESTPATIKSVSEVTDDDMIFDIGPDSAKALADIIMNAKTILWNGPVGVFEFDQFAKGTEIIAKAIAE---SPAFSIAGGGDTLAAIDKFGIADKVSYISTGGGAFLEFVEGKVLPAVAILEE 383          
The following BLAST results are available for this feature:
BLAST of CX069914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_XANC86.765e-5245.30Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]
PGK_RUTMC6.765e-5247.37Phosphoglycerate kinase OS=Ruthia magnifica subsp.... [more]
PGK_XANFL8.836e-5244.59Phosphoglycerate kinase OS=Xanthobacter flavus GN=... [more]
PGK_THIDA8.836e-5244.68Phosphoglycerate kinase OS=Thiobacillus denitrific... [more]
PGK_PSEAE8.836e-5247.44Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEAB8.836e-5247.44Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEA88.836e-5247.44Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_ZYMMO1.507e-5145.69Phosphoglycerate kinase OS=Zymomonas mobilis GN=pg... [more]
PGK_XYLFT1.507e-5145.41Phosphoglycerate kinase OS=Xylella fastidiosa (str... [more]
PGK_TOLAT1.507e-5146.38Phosphoglycerate kinase OS=Tolumonas auensis (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_13F05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F05-K9-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069914 ID=CX069914; Name=CX069914; organism=Citrus sinensis; type=EST; length=766bp
GTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGGAACTAGATT
ATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCTGCCATTGTT
GGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATCACTTTTGGA
GAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTACCTTTTACA
AGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAAGACAAGCTT
GATCTCGCTACGTCACTTATGGAGAAGGCCAAATCTAAAGGGGTGTCTCT
TCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTGCTGATGCCA
ACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGGATGGGCTTG
GATGTTGGACCTGATGCCATCAAGTCATTCAGTGAAGCTTTGGATACTAC
TAAAACCATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAAT
TTGCTGCTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGGG
AAGGGAGTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAGA
GAAGGTTGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGAG
CCAGCTTAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCTT
GATGATGCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCATT
TCCAGAGTTGTATGTG
back to top