CX069902

Overview
NameCX069902
Unique NameCX069902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H31_DEBHA (Histone H3.1/H3.2 OS=Debaryomyces hansenii GN=HHT1 PE=3 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 3.091e-54
Identity = 109/136 (80.15%), Postives = 117/136 (86.03%), Query Frame = -2 
Query:  194 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 601
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF                V LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H3_TRIRE (Histone H3 OS=Trichoderma reesei GN=HHT1 PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.037e-54
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = -2 
Query:  197 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 601
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                V LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H3_PHANO (Histone H3 OS=Phaeosphaeria nodorum GN=HHT1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.037e-54
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = -2 
Query:  197 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 601
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                V LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H3_NEUCR (Histone H3 OS=Neurospora crassa GN=hh3 PE=1 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 4.037e-54
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = -2 
Query:  197 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 601
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                V LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H3_MARPO (Histone H3 OS=Marchantia polymorpha PE=3 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 4.037e-54
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = -2 
Query:  197 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 601
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                V LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H3_MAGGR (Histone H3 OS=Magnaporthe grisea GN=HHT1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.037e-54
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = -2 
Query:  197 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 601
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                V LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H3_GIBZE (Histone H3 OS=Gibberella zeae GN=HHT1 PE=3 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 4.037e-54
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = -2 
Query:  197 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 601
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                V LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H3_CHAGB (Histone H3 OS=Chaetomium globosum GN=HHT1 PE=2 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 4.037e-54
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = -2 
Query:  197 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 601
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                V LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H31_USTMA (Histone H3.1 OS=Ustilago maydis GN=HHT1 PE=3 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 4.037e-54
Identity = 110/136 (80.88%), Postives = 115/136 (84.56%), Query Frame = -2 
Query:  194 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 601
            MARTKQTARKSTGGKAPRKQLATKAARKSAPA GGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                V LFEDTNL AIHAKRVTI PKDI LARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPAAGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVSLFEDTNLAAIHAKRVTIQPKDIALARRLRGERS 136
[Close]
BLAST of CX069902 vs. ExPASy Swiss-Prot
Match: H33L2_CAEEL (Histone H3.3-like type 2 OS=Caenorhabditis elegans GN=his-74 PE=2 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 5.273e-54
Identity = 111/136 (81.62%), Postives = 115/136 (84.56%), Query Frame = -2 
Query:  194 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 601
            MARTKQTARKSTGGKAPRK LATKAARKSA  TG VKK HRFRPGTVALREIR+YQKSTELL+RKLPFQRLVREIAQDFKTDLRF                VGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136
The following BLAST results are available for this feature:
BLAST of CX069902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H31_DEBHA3.091e-5480.15Histone H3.1/H3.2 OS=Debaryomyces hansenii GN=HHT1... [more]
H3_TRIRE4.037e-5480.74Histone H3 OS=Trichoderma reesei GN=HHT1 PE=3 SV=2[more]
H3_PHANO4.037e-5480.74Histone H3 OS=Phaeosphaeria nodorum GN=HHT1 PE=3 S... [more]
H3_NEUCR4.037e-5480.74Histone H3 OS=Neurospora crassa GN=hh3 PE=1 SV=3[more]
H3_MARPO4.037e-5480.74Histone H3 OS=Marchantia polymorpha PE=3 SV=3[more]
H3_MAGGR4.037e-5480.74Histone H3 OS=Magnaporthe grisea GN=HHT1 PE=3 SV=1[more]
H3_GIBZE4.037e-5480.74Histone H3 OS=Gibberella zeae GN=HHT1 PE=3 SV=3[more]
H3_CHAGB4.037e-5480.74Histone H3 OS=Chaetomium globosum GN=HHT1 PE=2 SV=... [more]
H31_USTMA4.037e-5480.88Histone H3.1 OS=Ustilago maydis GN=HHT1 PE=3 SV=3[more]
H33L2_CAEEL5.273e-5481.62Histone H3.3-like type 2 OS=Caenorhabditis elegans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E11-I21-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069902 ID=CX069902; Name=CX069902; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTAAAAGGCTAATTATCTATTAGATTAAAAACCCTCGAAAACA
TTTTAACAAACACCTTAGATACATACTAGACCCGATCTAATCCATCGGAT
AGACATCCAAACATTCATCTAAACCCCAAATATTGACCGAAAGACTAACA
TCGCAGTAAGAGGAACAAAATAAATTAAATCAGAAAGTTCCTAAGCCCTT
TCACCCCTGATCCGCCTAGCAAGCTGAATGTCCTTGGGCATAATAGTGAC
CCTCTTAGCATGAATAGCGCAGAGGTTGGTGTCCTCGAACAGCCCAACAA
GATAAGCCTCAGCAGCCTCCTGAAGTGCAGCAACAGCGCTGCTCTGGAAC
CTCAGATCCGTCTTGAAATCCTGAGCGATTTCCCTCACCAATCTCTGGAA
CGGAAGCTTCCTAATAAGAAGCTCAGTGCTCTTCTGGTACTTCCTGATTT
CACGGAGTGCGACAGTTCCTGGACGGAACCTGTGAGGCTTCTTCACTCCT
CCGGTTGCCGGTGCGGATTTCCTTGCCGCCTTGGTCGCCAGTTGCTTTCT
TGGGGCCTTGCCTCCGGTGGACTTGCGAGCGGTTTGCTTCGTGCGGGCCA
TTGATTTGGGAAATTAAGTGTTTCTTTTTTCTTGGGAGATCTTA
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