CX069901

Overview
NameCX069901
Unique NameCX069901
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX069901 vs. ExPASy Swiss-Prot
Match: H3L2_LILLO (Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 47/86 (54.65%), Postives = 51/86 (59.30%), Query Frame = 3 
Query:   45 MARTKQTARKSTGGKAPRKQLATKAARKS-APATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 299
            MAR K TAR STGGKAPRKQLA+KA RK+  P T GVK+P     G                  RKLPFQ LVR+I QD KT LRF
Sbjct:    1 MARMKHTARMSTGGKAPRKQLASKALRKAPPPPTKGVKQPTTTTSGKWRFARFH----------RKLPFQGLVRKIWQDLKTHLRF 76
The following BLAST results are available for this feature:
BLAST of CX069901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H3L2_LILLO4.516e-1354.65Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E11-I21-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069901 ID=CX069901; Name=CX069901; organism=Citrus sinensis; type=EST; length=644bp
TTAAGATCTCCCAAGAAAAAAGAAACACTTAATTTCCCAAATCAATGGCC
CGCACGAAGCAAACCGCTCGCAAGTCCACCGGAGGCAAGGCCCCAAGAAA
GCAACTGGCGACCAAGGCGGCAAGGAAATCCGCACCGGCAACCGGAGGAG
TGAAGAAGCCTCACAGGTTCCGTCCAGGAACTGTCGCACTCCGTGAAATC
AGGAAGTACCAGAAGAGCACTGAGCTTCTTATTAGGAAGCTTCCGTTCCA
GAGATTGGTGAGGGAAATCGCTCAGGATTTCAAGACGGATCTGAGGTTCC
AGAGCAGCGCTGTTGCTGCACTTCAGGAGGCTGCTGAGGCTTATCTTGTT
GGGCTGTTCGAGGACACCAACCTCTGCGCTATTCATGCTAAGAGGGTCAC
TATTATGCCCAAGGACATTCAGCTTGCTAGGCGGATCAGGGGTGAAAGGG
CTTAGGAACTTTCTGATTTAATTTATTTTGTTCCTCTTACTGCGATGTTA
GTCTTTCGGTCAATATTTGGGGTTTAGATGAATGTTTGGATGTCTATCCG
ATGGATTAGATCGGGTCTAGTATGTATCTAAGGTGTTTGTTAAAATGTTT
TCGAGGGTTTTTAATCTAATAGATAATTAGCCTTTTAAAAAAAA
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