CX069886

Overview
NameCX069886
Unique NameCX069886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_CYNDA (Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.138e-46
Identity = 85/120 (70.83%), Postives = 99/120 (82.50%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+GHHLTSAAI+GHDG+VWAQS+ FP FKPEE+A IMKDF+EPG LAPTGL LG TKYMVIQGEPGAVIR              QAL+ GIYDEP+TPGQCNM++E+LGDYLI+QG+
Sbjct:   12 MCEIEGHHLTSAAIIGHDGTVWAQSAAFPAFKPEEMANIMKDFDEPGFLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGVTVKKTGQALVIGIYDEPMTPGQCNMVIEKLGDYLIEQGM 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_CUCME (Profilin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.138e-46
Identity = 86/120 (71.67%), Postives = 98/120 (81.67%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+G+HLTSAAI+G DGSVWAQS NFPQ KPEE+A I+ DF +PG+LAPTGL++GGTKYMVIQGEPGAVIR               AL+ GIYDEP+TPGQCNMIVERLGDYLIDQGL
Sbjct:   12 MCEIEGNHLTSAAIIGQDGSVWAQSQNFPQLKPEEVAGIVGDFADPGTLAPTGLYIGGTKYMVIQGEPGAVIRGKKGPGGATVKKTGMALVIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_PRUDU (Profilin OS=Prunus dulcis PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.646e-46
Identity = 89/120 (74.17%), Postives = 99/120 (82.50%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDG+ LT+AAI+G DGSVW+QS+ FP FKPEEIAAI+KDF++PG+LAPTGL LGGTKYMVIQGE GAVIR              QALI GIYDEPLTPGQCNMIVERLGDYLI+QGL
Sbjct:   12 MCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_ANACO (Profilin OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.646e-46
Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 358
            MC+IDG HL+SAAI+GHD +VWAQS NFPQFKPEEI+AI+ DFE PGSLAPTGL+LGGTKYMVIQGEPG VIR               ALI G+YDEP+TPGQCNM+VERLGDYL++QG
Sbjct:   12 MCEIDGQHLSSAAILGHDSTVWAQSPNFPQFKPEEISAILNDFENPGSLAPTGLYLGGTKYMVIQGEPGVVIRGKKGTGGITVKKTNLALIIGVYDEPMTPGQCNMVVERLGDYLLEQG 130          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF3_WHEAT (Profilin-3 OS=Triticum aestivum GN=PRO3 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.646e-46
Identity = 88/118 (74.58%), Postives = 95/118 (80.51%), Query Frame = 2
Query:    5 CDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 358
            C+IDG +LTSAAI+GHDGSVWAQS NFPQFKPEE A I+KDFEEPG LAPTGL LGGTKYMVIQGEPG VIR               ALI GIYDEP+TPGQCN++VERLGDYLIDQG
Sbjct:   13 CEIDGQNLTSAAILGHDGSVWAQSPNFPQFKPEENAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF2_PHLPR (Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.646e-46
Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+GHHL SAAI+GHDG+VWAQS++FPQFKPEEI  IMKDF+EPG LAPTG+ + G KYMVIQGEPGAVIR              QAL+ GIYDEP+TPGQCNM+VERLGDYL++QG+
Sbjct:   12 MCEIEGHHLASAAILGHDGTVWAQSADFPQFKPEEITGIMKDFDEPGHLAPTGMFVAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGM 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF3_MALDO (Profilin-3 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.762e-46
Identity = 86/120 (71.67%), Postives = 101/120 (84.17%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDG+ LT+AAI+G DGSVW+QS++FP FKPEEIAAI+KDF++PG+LAPTGL LGGTKYMVIQGEPGAVIR              QAL+ GIYDEP+TPGQCN++VERLGDYLI+QGL
Sbjct:   12 MCDIDGNRLTAAAILGQDGSVWSQSASFPAFKPEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTSQALLIGIYDEPVTPGQCNIVVERLGDYLIEQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF2_SOYBN (Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.762e-46
Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 358
            +C I+G+HLT AAI+G DGSVW QS++FPQFKPEEI AIM DF EPGSLAPTGL+LGGTKYMVIQGEPGAVIR               ALI GIYDEP+TPGQCNM+VERLGDYLIDQG
Sbjct:   12 LCGIEGNHLTHAAIIGQDGSVWLQSTDFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVERLGDYLIDQG 130          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_PRUPE (Profilin OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 6.220e-46
Identity = 84/120 (70.00%), Postives = 98/120 (81.67%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+G+HL++AAI+GHDGSVWAQS+ FPQ KPEE+  I+ DF EPGSLAPTGL+LGGTKYMVIQGEPGAVIR               AL+ GIYDEP+TPGQCNMIVERLGDYL++QGL
Sbjct:   12 MCEIEGNHLSAAAIIGHDGSVWAQSATFPQLKPEEVTGILNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKSTLALLIGIYDEPMTPGQCNMIVERLGDYLVEQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_BETVE (Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 8.123e-46
Identity = 90/122 (73.77%), Postives = 97/122 (79.51%), Query Frame = 2
Query:    2 MCDIDGHHLTS--AAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDG    S  +AIVGHDGSVWAQSS+FPQFKP+EI  IMKDFEEPG LAPTGLHLGG KYMVIQGE GAVIR              QAL+FGIY+EP+TPGQCNM+VERLGDYLIDQGL
Sbjct:   12 MCDIDGQASNSLASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFEEPGHLAPTGLHLGGIKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLIDQGL 133          
The following BLAST results are available for this feature:
BLAST of CX069886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PROF_CYNDA2.138e-4670.83Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1[more]
PROF_CUCME2.138e-4671.67Profilin OS=Cucumis melo PE=1 SV=1[more]
PROF_PRUDU3.646e-4674.17Profilin OS=Prunus dulcis PE=1 SV=1[more]
PROF_ANACO3.646e-4671.43Profilin OS=Ananas comosus PE=1 SV=1[more]
PROF3_WHEAT3.646e-4674.58Profilin-3 OS=Triticum aestivum GN=PRO3 PE=2 SV=1[more]
PROF2_PHLPR3.646e-4669.17Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1[more]
PROF3_MALDO4.762e-4671.67Profilin-3 OS=Malus domestica PE=1 SV=1[more]
PROF2_SOYBN4.762e-4673.11Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1[more]
PROF_PRUPE6.220e-4670.00Profilin OS=Prunus persica PE=1 SV=1[more]
PROF_BETVE8.123e-4673.77Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E03-I5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069886 ID=CX069886; Name=CX069886; organism=Citrus sinensis; type=EST; length=486bp
GATGTGCGATATCGACGGCCATCATCTCACCTCAGCTGCGATCGTCGGTC
ACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCCTCAGTTCAAGCCT
GAAGAGATTGCTGCAATCATGAAAGATTTTGAAGAGCCCGGTTCTCTTGC
CCCAACTGGTTTGCACCTTGGAGGCACCAAGTACATGGTAATCCAGGGTG
AGCCTGGAGCTGTGATTCGTGGAAAAAAGGGTTCTGGTGGTGTCACCGTC
AAGAAAACGGGCCAAGCCCTGATTTTTGGTATATACGATGAACCATTGAC
TCCAGGACAGTGCAACATGATCGTTGAGAGGTTGGGGGATTATCTCATTG
ATCAGGGCCTGTAGATTCCATGTCAACTTCAAATGGTTTCGATATATTGC
TTTCTGGTTTTCGGGCTTTGCCTCTTCTTCCATATTTGGTCTTGAACTGG
CAGTATAAATTTGTTTGCTGCAAAAATAACTGTGTG
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