CX069886

Overview
NameCX069886
Unique NameCX069886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF3_MAIZE (Profilin-3 OS=Zea mays GN=PRO3 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.061e-45
Identity = 85/120 (70.83%), Postives = 98/120 (81.67%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+GHHL+SAAIVGHDG+VWAQS+ FPQFKPEE+  I+KDF+EPG LAP GL LG TKYMVIQGEPGAVIR              QAL+ GIYDEP+TPGQCNM+VERLGDYL++QGL
Sbjct:   12 MCEIEGHHLSSAAIVGHDGAVWAQSTAFPQFKPEEMTNIIKDFDEPGFLAPIGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVIGIYDEPMTPGQCNMVVERLGDYLVEQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF2_OLEEU (Profilin-2 OS=Olea europaea GN=PRO2 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.061e-45
Identity = 88/123 (71.54%), Postives = 98/123 (79.67%), Query Frame = 2
Query:    2 MCDIDGHH---LTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDI+GH    LT+AAIVGHDGSVWAQS+ FPQFKPEE+  IM DF EPG LAPTGLHLGGTKYMVIQGE GAVIR              QAL+FGIY+EP+TPGQCNM+VERLGDYL++QGL
Sbjct:   12 MCDIEGHEGHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLLEQGL 134          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_CAPAN (Profilin OS=Capsicum annuum PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.386e-45
Identity = 88/120 (73.33%), Postives = 97/120 (80.83%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+G+ LTSAAI+G DGSVWAQS+ FPQFKPEEI AIM DF EPG+LAPTGL+LGGTKYMVIQGE GAVIR              QALI GIYDEP+TPGQCNMIVERLGDYLI+Q L
Sbjct:   12 MCEIEGNRLTSAAIIGQDGSVWAQSATFPQFKPEEITAIMNDFAEPGTLAPTGLYLGGTKYMVIQGEAGAVIRGKKGPGGITVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIEQSL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_ARAHY (Profilin OS=Arachis hypogaea PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.386e-45
Identity = 87/120 (72.50%), Postives = 97/120 (80.83%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            +C+I+G HL+SAAI+G DG VWAQSS+FPQFKPEEI AIM DF EPGSLAPTGL+LGGTKYMVIQGEPGA+I               QALI GIYD+P+TPGQCNMIVERLGDYLID GL
Sbjct:   12 LCEIEGDHLSSAAILGQDGGVWAQSSHFPQFKPEEITAIMNDFAEPGSLAPTGLYLGGTKYMVIQGEPGAIIPGKKGPGGVTIEKTNQALIIGIYDKPMTPGQCNMIVERLGDYLIDTGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF1_PHLPR (Profilin-1 OS=Phleum pratense GN=PRO1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.386e-45
Identity = 82/120 (68.33%), Postives = 97/120 (80.83%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+GHHL SAAI+GHDG+VWAQS++FPQFKPEEI  IMKDF+EPG LAPTG+ + G KYMVIQGEPG VIR              QAL+ GIYDEP+TPGQCNM+VERLGDYL++QG+
Sbjct:   12 MCEIEGHHLASAAILGHDGTVWAQSADFPQFKPEEITGIMKDFDEPGHLAPTGMFVAGAKYMVIQGEPGRVIRGKKGAGGITIKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGM 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF1_OLEEU (Profilin-1 OS=Olea europaea GN=PRO1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.386e-45
Identity = 87/123 (70.73%), Postives = 98/123 (79.67%), Query Frame = 2
Query:    2 MCDIDGHH---LTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDI+GH    LT+AAIVGHDGSVWAQS+ FPQFKPEE+  IM DF EPG LAPTGLHLGGTKYMVIQGE GAVIR              QAL+FGIY+EP+TPGQCNM+VERLGDYL++QG+
Sbjct:   12 MCDIEGHEDHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVEQGM 134          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_PRUAV (Profilin OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.810e-45
Identity = 88/120 (73.33%), Postives = 98/120 (81.67%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDIDG+ LT+AAI+G DGSVW+QS+ FP FKPEEIAAI+KD ++PG+LAPTGL LGGTKYMVIQGE GAVIR              QALI GIYDEPLTPGQCNMIVERLGDYLI+QGL
Sbjct:   12 MCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDLDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF2_MALDO (Profilin-2 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.810e-45
Identity = 83/120 (69.17%), Postives = 97/120 (80.83%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+I+G+HL++AAI+GH+GSVWAQS+ FPQ KPEE+  IM DF EPGSLAPTGL+LGGTKYMVIQGEPG VIR               AL+ GIYDEP+TPGQCNM+VERLGDYLI+QGL
Sbjct:   12 MCEIEGNHLSAAAIIGHNGSVWAQSATFPQLKPEEVTGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGVVIRGKKGPGGVTVKKSTMALLIGIYDEPMTPGQCNMVVERLGDYLIEQGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_APIGR (Profilin OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.087e-45
Identity = 87/123 (70.73%), Postives = 99/123 (80.49%), Query Frame = 2
Query:    2 MCDIDGHH---LTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+++G+    LT+AAI+GHDGSVWAQSS FPQ KPEEIA IMKDF+EPG LAPTGL+LGG KYMVIQGEP AVIR              QAL+FG+YDEP+TPGQCN+IVERLGDYLIDQGL
Sbjct:   12 MCEVEGNPGQTLTAAAIIGHDGSVWAQSSTFPQIKPEEIAGIMKDFDEPGHLAPTGLYLGGAKYMVIQGEPNAVIRGKKGSGGVTIKKTGQALVFGVYDEPVTPGQCNVIVERLGDYLIDQGL 134          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF5_MAIZE (Profilin-5 OS=Zea mays GN=PRO5 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.087e-45
Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 358
            +CDI+G HL++AAIVGHDGSVWAQS NFP+ KPEE+A ++KDF+EPG+LAPTGL +GGTKYMVIQGEPG VIR               +LI GIYDEP+TPGQCNM+VERLGDYLI+QG
Sbjct:   12 LCDIEGQHLSAAAIVGHDGSVWAQSENFPELKPEEVAGMIKDFDEPGTLAPTGLFVGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMSLIIGIYDEPMTPGQCNMVVERLGDYLIEQG 130          
The following BLAST results are available for this feature:
BLAST of CX069886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PROF3_MAIZE1.061e-4570.83Profilin-3 OS=Zea mays GN=PRO3 PE=2 SV=1[more]
PROF2_OLEEU1.061e-4571.54Profilin-2 OS=Olea europaea GN=PRO2 PE=1 SV=1[more]
PROF_CAPAN1.386e-4573.33Profilin OS=Capsicum annuum PE=1 SV=1[more]
PROF_ARAHY1.386e-4572.50Profilin OS=Arachis hypogaea PE=1 SV=1[more]
PROF1_PHLPR1.386e-4568.33Profilin-1 OS=Phleum pratense GN=PRO1 PE=1 SV=1[more]
PROF1_OLEEU1.386e-4570.73Profilin-1 OS=Olea europaea GN=PRO1 PE=1 SV=1[more]
PROF_PRUAV1.810e-4573.33Profilin OS=Prunus avium PE=1 SV=1[more]
PROF2_MALDO1.810e-4569.17Profilin-2 OS=Malus domestica PE=1 SV=1[more]
PROF_APIGR3.087e-4570.73Profilin OS=Apium graveolens PE=1 SV=1[more]
PROF5_MAIZE3.087e-4568.91Profilin-5 OS=Zea mays GN=PRO5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E03-I5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069886 ID=CX069886; Name=CX069886; organism=Citrus sinensis; type=EST; length=486bp
GATGTGCGATATCGACGGCCATCATCTCACCTCAGCTGCGATCGTCGGTC
ACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCCTCAGTTCAAGCCT
GAAGAGATTGCTGCAATCATGAAAGATTTTGAAGAGCCCGGTTCTCTTGC
CCCAACTGGTTTGCACCTTGGAGGCACCAAGTACATGGTAATCCAGGGTG
AGCCTGGAGCTGTGATTCGTGGAAAAAAGGGTTCTGGTGGTGTCACCGTC
AAGAAAACGGGCCAAGCCCTGATTTTTGGTATATACGATGAACCATTGAC
TCCAGGACAGTGCAACATGATCGTTGAGAGGTTGGGGGATTATCTCATTG
ATCAGGGCCTGTAGATTCCATGTCAACTTCAAATGGTTTCGATATATTGC
TTTCTGGTTTTCGGGCTTTGCCTCTTCTTCCATATTTGGTCTTGAACTGG
CAGTATAAATTTGTTTGCTGCAAAAATAACTGTGTG
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