CX069886

Overview
NameCX069886
Unique NameCX069886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_BRANA (Profilin OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.406e-43
Identity = 83/123 (67.48%), Postives = 94/123 (76.42%), Query Frame = 2
Query:    2 MCDI---DGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCD+    GHHL +AAI GHDGSVWAQS+NFPQFK +E A IMKDF+EPG LAPTGL L G KYMVIQGEPGAVIR              Q+ +FGIY+EP+TPGQCNM+VERLGDYLI+Q L
Sbjct:   12 MCDVGDGQGHHLAAAAIFGHDGSVWAQSANFPQFKGQEFANIMKDFDEPGHLAPTGLFLAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLIEQDL 134          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF2_TOBAC (Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.406e-43
Identity = 83/122 (68.03%), Postives = 97/122 (79.51%), Query Frame = 2
Query:    2 MCDIDG---HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 358
            M DI+G   +HL +AAI+G+DGSVWAQS+ FP+FKPEEI  IMKDF+EPG LAPTGL LGG KYMVIQGEPGAVIR              QALIFGIY+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:   12 MADIEGQQGNHLAAAAILGNDGSVWAQSTTFPKFKPEEITNIMKDFDEPGHLAPTGLFLGGAKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGIYEEPVTPGQCNMVVEKIGDYLVDQG 133          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF3_AMBAR (Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.873e-42
Identity = 80/122 (65.57%), Postives = 96/122 (78.69%), Query Frame = 2
Query:    2 MCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDI+G  HHLTSAAI+GHDG+VWAQSSNFPQFKPEE+  I+ +F++ G+LAPTG+ + G KYMV+QGE GAVIR              QAL+ GIYDEP+ PGQCNM+VERLGDYLIDQG+
Sbjct:   12 MCDIEGTGHHLTSAAILGHDGTVWAQSSNFPQFKPEEMKGIITEFDQAGTLAPTGMFIAGAKYMVLQGEQGAVIRGKKGAGGICIKKTGQALVMGIYDEPVAPGQCNMVVERLGDYLIDQGM 133          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF3_TOBAC (Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 7.116e-42
Identity = 79/114 (69.30%), Postives = 91/114 (79.82%), Query Frame = 2
Query:   17 GHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 358
            G HL +AAI+GHDGSVWAQS +FP+FKPEEI  IMKDF+EPG LAPTGL L G KYMVIQGEPGAVIR              QALIFG+Y+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:   19 GQHLAAAAILGHDGSVWAQSPHFPKFKPEEITNIMKDFDEPGFLAPTGLFLAGIKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGLYEEPVTPGQCNMVVEKIGDYLVDQG 132          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF1_PARJU (Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 7.116e-42
Identity = 81/121 (66.94%), Postives = 93/121 (76.86%), Query Frame = 2
Query:    2 MCDI-DGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCD+ DG+   SAAI+GHDGSVWAQS+NFPQ KPEE+  IM DF E G LAPTGL LGGTKYMVIQGE GAVIR              QA++ GIYDEP+TPGQCN++VERLGDYL++QGL
Sbjct:   12 MCDVGDGNTPASAAIIGHDGSVWAQSANFPQLKPEEVTGIMNDFNEAGFLAPTGLFLGGTKYMVIQGESGAVIRGKKGSGGATLKKTGQAIVIGIYDEPMTPGQCNLVVERLGDYLLEQGL 132          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF1_ARATH (Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.585e-41
Identity = 80/120 (66.67%), Postives = 92/120 (76.67%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCD++G+HLT+AAI+G DGSVWAQS+ FPQ KP+EI  I KDFEEPG LAPTGL LGG KYMVIQGE GAVIR              QAL+FG YDEP+T GQCN++VERLGDYLI+  L
Sbjct:   12 MCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF2_ARATH (Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.071e-41
Identity = 81/120 (67.50%), Postives = 91/120 (75.83%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MC+++G+HLT AAI G DGSVWAQSS FPQ KP EIA I KDFEE G LAPTGL LGG KYMV+QGE GAVIR              QAL+FGIYDEP+T GQCN++VERLGDYLI+ GL
Sbjct:   12 MCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVERLGDYLIESGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF1_ARTVU (Profilin-1 OS=Artemisia vulgaris PE=1 SV=3)

HSP 1 Score: 166.007 bits (419), Expect = 7.868e-41
Identity = 80/122 (65.57%), Postives = 94/122 (77.05%), Query Frame = 2
Query:    2 MCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDI+G   HLTSAAI G DG+VWA+S++FP+FKP EI AI+K+F E G LAPTGL LGG KYMVIQGE GAVIR              QA++FGIYDEP+ PGQCNM+VERLGDYL+DQG+
Sbjct:   12 MCDIEGTGQHLTSAAIFGTDGTVWAKSASFPEFKPNEIDAIIKEFNEAGQLAPTGLFLGGAKYMVIQGEAGAVIRGKKGAGGICIKKTGQAMVFGIYDEPVAPGQCNMVVERLGDYLLDQGM 133          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF5_ARATH (Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.028e-40
Identity = 79/120 (65.83%), Postives = 90/120 (75.00%), Query Frame = 2
Query:    2 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCD+ G+ LT+AAI+G DGSVWAQS+NFPQ KPEEI  I  DF  PG+LAPTGL LGG KYMVIQGEP AVIR               AL+FGIYDEP+TPGQCNM+VE LG+YLI+ GL
Sbjct:   12 MCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVENLGEYLIESGL 131          
BLAST of CX069886 vs. ExPASy Swiss-Prot
Match: PROF_HELAN (Profilin OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.289e-40
Identity = 77/122 (63.11%), Postives = 95/122 (77.87%), Query Frame = 2
Query:    2 MCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 361
            MCDI+G   HLTSAAI+G DG+VWAQS+ FPQFKPEE+  I+K+F+E G+LAPTG+ + G KYMV+QGEPGAVIR              QA+I GIYDEP+ PGQCNM+VERLGDYL++QG+
Sbjct:   12 MCDIEGTGQHLTSAAILGLDGTVWAQSAKFPQFKPEEMKGIIKEFDEAGTLAPTGMFIAGAKYMVLQGEPGAVIRGKKGAGGICIKKTGQAMIMGIYDEPVAPGQCNMVVERLGDYLLEQGM 133          
The following BLAST results are available for this feature:
BLAST of CX069886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PROF_BRANA8.406e-4367.48Profilin OS=Brassica napus PE=2 SV=1[more]
PROF2_TOBAC8.406e-4368.03Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1[more]
PROF3_AMBAR1.873e-4265.57Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 ... [more]
PROF3_TOBAC7.116e-4269.30Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2 SV=1[more]
PROF1_PARJU7.116e-4266.94Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1[more]
PROF1_ARATH1.585e-4166.67Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV... [more]
PROF2_ARATH2.071e-4167.50Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV... [more]
PROF1_ARTVU7.868e-4165.57Profilin-1 OS=Artemisia vulgaris PE=1 SV=3[more]
PROF5_ARATH1.028e-4065.83Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV... [more]
PROF_HELAN2.289e-4063.11Profilin OS=Helianthus annuus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E03-I5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069886 ID=CX069886; Name=CX069886; organism=Citrus sinensis; type=EST; length=486bp
GATGTGCGATATCGACGGCCATCATCTCACCTCAGCTGCGATCGTCGGTC
ACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCCTCAGTTCAAGCCT
GAAGAGATTGCTGCAATCATGAAAGATTTTGAAGAGCCCGGTTCTCTTGC
CCCAACTGGTTTGCACCTTGGAGGCACCAAGTACATGGTAATCCAGGGTG
AGCCTGGAGCTGTGATTCGTGGAAAAAAGGGTTCTGGTGGTGTCACCGTC
AAGAAAACGGGCCAAGCCCTGATTTTTGGTATATACGATGAACCATTGAC
TCCAGGACAGTGCAACATGATCGTTGAGAGGTTGGGGGATTATCTCATTG
ATCAGGGCCTGTAGATTCCATGTCAACTTCAAATGGTTTCGATATATTGC
TTTCTGGTTTTCGGGCTTTGCCTCTTCTTCCATATTTGGTCTTGAACTGG
CAGTATAAATTTGTTTGCTGCAAAAATAACTGTGTG
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