CX069885

Overview
NameCX069885
Unique NameCX069885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_LILLO (Profilin-1 OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.627e-47
Identity = 88/120 (73.33%), Postives = 99/120 (82.50%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCD+DG HLT++AIVGHDGS+WAQS+ FPQFKPEEI  IM DF EPGSLAPTGL+L G KYMVIQGEPGAVIR             GQALIFGIY+EP+TPGQCNM+VER+GDYL+DQGL
Sbjct:   12 MCDVDGQHLTASAIVGHDGSIWAQSAGFPQFKPEEITGIMNDFAEPGSLAPTGLYLAGMKYMVIQGEPGAVIRGKKGSGGVTIKKTGQALIFGIYEEPMTPGQCNMVVERMGDYLVDQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_MAIZE (Profilin-1 OS=Zea mays GN=PRO1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.775e-47
Identity = 88/120 (73.33%), Postives = 102/120 (85.00%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+I+GHHLTSAAIVGHDG+ WAQS+ FP+FKPEE+AAIMKDF+EPG LAPTGL LGGTKYMVIQGEPGAVIR             GQ+LI GIYDEP+TPGQCN++VERLGDYL++QG+
Sbjct:   12 MCEIEGHHLTSAAIVGHDGATWAQSTAFPEFKPEEMAAIMKDFDEPGHLAPTGLILGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQSLIIGIYDEPMTPGQCNLVVERLGDYLLEQGM 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_HEVBR (Profilin-1 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.775e-47
Identity = 89/120 (74.17%), Postives = 100/120 (83.33%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+I+G+HLT+AAI+G DGSVWAQSSNFPQFK EEI AIM DF+EPG+LAPTGLHLGGTKYMVIQGE GAVIR              QALI GIYDEP+TPGQCNMIVERLGDYL++QG+
Sbjct:   12 MCEIEGNHLTAAAIIGQDGSVWAQSSNFPQFKSEEITAIMSDFDEPGTLAPTGLHLGGTKYMVIQGEAGAVIRGKKGPGGVTVRKTNQALIIGIYDEPMTPGQCNMIVERLGDYLLEQGM 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_CHEAL (Profilin OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.182e-47
Identity = 86/120 (71.67%), Postives = 100/120 (83.33%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDI+G+HL+SAAI+GHDG+VWAQS +FPQ KPEE++AIMKDF EPGSLAPTGLHLGGTKYMVIQGEPG VIR              QALI GIY EP+TPGQCNM+VER+GDYL++QG+
Sbjct:   12 MCDIEGNHLSSAAILGHDGTVWAQSPSFPQLKPEEVSAIMKDFNEPGSLAPTGLHLGGTKYMVIQGEPGDVIRGKKGPGGVTIKKTNQALIIGIYGEPMTPGQCNMVVERIGDYLVEQGM 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROFA_ORYSJ (Profilin-A OS=Oryza sativa subsp. japonica GN=Os10g0323600 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.182e-47
Identity = 89/120 (74.17%), Postives = 100/120 (83.33%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+I+GHHLTSAAIVGHDG+VWAQS+ FPQFKPEE+  IMKDF+EPG LAPTGL LG TKYMVIQGEPGAVIR             GQAL+ GIYDEP+TPGQCNM+VERLGDYL++QGL
Sbjct:   12 MCEIEGHHLTSAAIVGHDGTVWAQSAAFPQFKPEEMTNIMKDFDEPGFLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_WHEAT (Profilin-1 (Fragment) OS=Triticum aestivum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 8.074e-47
Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = -1
Query:  273 CDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL*IP 638
            C+IDG HLTSAAI+GHDGSVW +S NFP+FKPEEIA I+KDFEEPG LAPTGL LGGTKYMVIQGEPG VIR             G ALI GIYDEP+TPGQCN++VERLGDYLIDQG  +P
Sbjct:   13 CEIDGQHLTSAAILGHDGSVWTESPNFPKFKPEEIAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQGYWVP 134          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF2_WHEAT (Profilin-2 OS=Triticum aestivum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.054e-46
Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = -1
Query:  285 CDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 638
            C+IDG HLTSAAI+GHDGSVWA+S NFP+FKPEEIA I+KDFEEPG LAPTGL LGGTKYMVIQGEPG VIR             G ALI GIYDEP+TPGQCN++VERLGDYLIDQG
Sbjct:   13 CEIDGQHLTSAAILGHDGSVWAESPNFPKFKPEEIAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF1_SOYBN (Profilin-1 OS=Glycine max GN=PRO1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.349e-46
Identity = 89/119 (74.79%), Postives = 98/119 (82.35%), Query Frame = -1
Query:  285 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 641
            +CDI+G+HLT AAI+G DGSVWAQS++FPQFKPEEI AIM DF EPGSLAPTGL+LGGTKYMVIQGEPGAVIR             G ALI GIYDEP+TPGQCNM+VER GDYLIDQG
Sbjct:   12 LCDIEGNHLTHAAIIGQDGSVWAQSTDFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVERPGDYLIDQG 130          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_MUSAC (Profilin OS=Musa acuminata PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.068e-46
Identity = 90/119 (75.63%), Postives = 97/119 (81.51%), Query Frame = -1
Query:  285 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 641
            +CDIDG  LT+AAIVGHDGSVWAQS  FPQ KPEEIAAIMKDF+EPGSLAPTGL+LGGTKYMVIQGEPGAVIR               ALI GIY+EP+TPGQCNM+VERLGDYL DQG
Sbjct:   12 LCDIDGQCLTAAAIVGHDGSVWAQSDAFPQCKPEEIAAIMKDFDEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGSGGVTIKKTNLALIIGIYNEPMTPGQCNMVVERLGDYLFDQG 130          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF2_HEVBR (Profilin-2 OS=Hevea brasiliensis GN=PRO2 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.068e-46
Identity = 87/119 (73.11%), Postives = 98/119 (82.35%), Query Frame = -1
Query:  285 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 641
            MC+I+G+HL++AAI+G DGSVWAQS+NFPQFK EEI  IM DF EPG+LAPTGL++GGTKYMVIQGEPGAVIR              QALI GIYDEP+TPGQCNMIVERLGDYLIDQG
Sbjct:   12 MCEIEGNHLSAAAIIGQDGSVWAQSANFPQFKSEEITGIMSDFHEPGTLAPTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 130          
The following BLAST results are available for this feature:
BLAST of CX069885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PROF1_LILLO1.627e-4773.33Profilin-1 OS=Lilium longiflorum PE=2 SV=1[more]
PROF1_MAIZE2.775e-4773.33Profilin-1 OS=Zea mays GN=PRO1 PE=1 SV=1[more]
PROF1_HEVBR2.775e-4774.17Profilin-1 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF_CHEAL6.182e-4771.67Profilin OS=Chenopodium album PE=1 SV=1[more]
PROFA_ORYSJ6.182e-4774.17Profilin-A OS=Oryza sativa subsp. japonica GN=Os10... [more]
PROF1_WHEAT8.074e-4772.95Profilin-1 (Fragment) OS=Triticum aestivum GN=PRO1... [more]
PROF2_WHEAT1.054e-4675.42Profilin-2 OS=Triticum aestivum GN=PRO2 PE=2 SV=1[more]
PROF1_SOYBN2.349e-4674.79Profilin-1 OS=Glycine max GN=PRO1 PE=1 SV=1[more]
PROF_MUSAC3.068e-4675.63Profilin OS=Musa acuminata PE=1 SV=1[more]
PROF2_HEVBR3.068e-4673.11Profilin-2 OS=Hevea brasiliensis GN=PRO2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E03-I5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069885 ID=CX069885; Name=CX069885; organism=Citrus sinensis; type=EST; length=641bp
TTTTGAGTATCAACAGTATCCAAAGATTCAAATTCTTCAAAACTGCAATA
CACATAAATTAAGGAAACATGAAGGAATTGGGGATGAAAAAAAAAGATAA
AAAAGGAACCCTAAAGAACCAAAAGAGGCGGGAAAAAAAAAAATCACTCT
TGTCCTCACACAGTTATTTTTGCAGCAAACAAATTTATACTGCCAGTTCA
AGACCAAATATGGAAGAAGAGGCAAAGCCCGAAAACCAGAAAGCAATATA
TCGAAACCATTTGAAGTTGACATGGAATCTACAGGCCCTGATCAATGAGA
TAATCCCCCAACCTCTCAACGATCATGTTGCACTGTCCTGGAGTCAATGG
TTCATCGTATATACCAAAAATCAGGGCTTGGCCCGTTTTCTTGACGGTGA
CACCACCAGAACCCTTTTTTCCACGAATCACAGCTCCAGGCTCACCCTGG
ATTACCATGTACTTGGTGCCTCCAAGGTGCAAACCAGTTGGGGCAAGAGA
ACCGGGCTCTTCAAAATCTTTCATGATTGCAGCAATCTCTTCAGGCTTGA
ACTGAGGGAAATTGGAGCTCTGGGCCCAAACGCTGCCGTCGTGACCGACG
ATCGCAGCTGAGGTGAGATGATGGCCGTCGATATCGCACAT
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