CX069885

Overview
NameCX069885
Unique NameCX069885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_CYNDA (Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.007e-46
Identity = 86/120 (71.67%), Postives = 100/120 (83.33%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+I+GHHLTSAAI+GHDG+VWAQS+ FP FKPEE+A IMKDF+EPG LAPTGL LG TKYMVIQGEPGAVIR             GQAL+ GIYDEP+TPGQCNM++E+LGDYLI+QG+
Sbjct:   12 MCEIEGHHLTSAAIIGHDGTVWAQSAAFPAFKPEEMANIMKDFDEPGFLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGVTVKKTGQALVIGIYDEPMTPGQCNMVIEKLGDYLIEQGM 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_CUCME (Profilin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.007e-46
Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+I+G+HLTSAAI+G DGSVWAQS NFPQ KPEE+A I+ DF +PG+LAPTGL++GGTKYMVIQGEPGAVIR             G AL+ GIYDEP+TPGQCNMIVERLGDYLIDQGL
Sbjct:   12 MCEIEGNHLTSAAIIGQDGSVWAQSQNFPQLKPEEVAGIVGDFADPGTLAPTGLYIGGTKYMVIQGEPGAVIRGKKGPGGATVKKTGMALVIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_PRUDU (Profilin OS=Prunus dulcis PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.835e-46
Identity = 89/120 (74.17%), Postives = 99/120 (82.50%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDG+ LT+AAI+G DGSVW+QS+ FP FKPEEIAAI+KDF++PG+LAPTGL LGGTKYMVIQGE GAVIR              QALI GIYDEPLTPGQCNMIVERLGDYLI+QGL
Sbjct:   12 MCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_ANACO (Profilin OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.835e-46
Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = -1
Query:  285 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 641
            MC+IDG HL+SAAI+GHD +VWAQS NFPQFKPEEI+AI+ DFE PGSLAPTGL+LGGTKYMVIQGEPG VIR               ALI G+YDEP+TPGQCNM+VERLGDYL++QG
Sbjct:   12 MCEIDGQHLSSAAILGHDSTVWAQSPNFPQFKPEEISAILNDFENPGSLAPTGLYLGGTKYMVIQGEPGVVIRGKKGTGGITVKKTNLALIIGVYDEPMTPGQCNMVVERLGDYLLEQG 130          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF3_WHEAT (Profilin-3 OS=Triticum aestivum GN=PRO3 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.835e-46
Identity = 89/118 (75.42%), Postives = 96/118 (81.36%), Query Frame = -1
Query:  285 CDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 638
            C+IDG +LTSAAI+GHDGSVWAQS NFPQFKPEE A I+KDFEEPG LAPTGL LGGTKYMVIQGEPG VIR             G ALI GIYDEP+TPGQCN++VERLGDYLIDQG
Sbjct:   13 CEIDGQNLTSAAILGHDGSVWAQSPNFPQFKPEENAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF2_PHLPR (Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.835e-46
Identity = 84/120 (70.00%), Postives = 99/120 (82.50%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+I+GHHL SAAI+GHDG+VWAQS++FPQFKPEEI  IMKDF+EPG LAPTG+ + G KYMVIQGEPGAVIR             GQAL+ GIYDEP+TPGQCNM+VERLGDYL++QG+
Sbjct:   12 MCEIEGHHLASAAILGHDGTVWAQSADFPQFKPEEITGIMKDFDEPGHLAPTGMFVAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGM 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF3_MALDO (Profilin-3 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.926e-46
Identity = 86/120 (71.67%), Postives = 101/120 (84.17%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDG+ LT+AAI+G DGSVW+QS++FP FKPEEIAAI+KDF++PG+LAPTGL LGGTKYMVIQGEPGAVIR              QAL+ GIYDEP+TPGQCN++VERLGDYLI+QGL
Sbjct:   12 MCDIDGNRLTAAAILGQDGSVWSQSASFPAFKPEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTSQALLIGIYDEPVTPGQCNIVVERLGDYLIEQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF2_SOYBN (Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.926e-46
Identity = 88/119 (73.95%), Postives = 97/119 (81.51%), Query Frame = -1
Query:  285 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 641
            +C I+G+HLT AAI+G DGSVW QS++FPQFKPEEI AIM DF EPGSLAPTGL+LGGTKYMVIQGEPGAVIR             G ALI GIYDEP+TPGQCNM+VERLGDYLIDQG
Sbjct:   12 LCGIEGNHLTHAAIIGQDGSVWLQSTDFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVERLGDYLIDQG 130          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_PRUPE (Profilin OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.166e-45
Identity = 84/120 (70.00%), Postives = 98/120 (81.67%), Query Frame = -1
Query:  282 MCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MC+I+G+HL++AAI+GHDGSVWAQS+ FPQ KPEE+  I+ DF EPGSLAPTGL+LGGTKYMVIQGEPGAVIR               AL+ GIYDEP+TPGQCNMIVERLGDYL++QGL
Sbjct:   12 MCEIEGNHLSAAAIIGHDGSVWAQSATFPQLKPEEVTGILNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKSTLALLIGIYDEPMTPGQCNMIVERLGDYLVEQGL 131          
BLAST of CX069885 vs. ExPASy Swiss-Prot
Match: PROF_BETVE (Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.523e-45
Identity = 91/122 (74.59%), Postives = 98/122 (80.33%), Query Frame = -1
Query:  282 MCDIDGHHLTS--AAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXGQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 641
            MCDIDG    S  +AIVGHDGSVWAQSS+FPQFKP+EI  IMKDFEEPG LAPTGLHLGG KYMVIQGE GAVIR             GQAL+FGIY+EP+TPGQCNM+VERLGDYLIDQGL
Sbjct:   12 MCDIDGQASNSLASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFEEPGHLAPTGLHLGGIKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLIDQGL 133          
The following BLAST results are available for this feature:
BLAST of CX069885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PROF_CYNDA4.007e-4671.67Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1[more]
PROF_CUCME4.007e-4672.50Profilin OS=Cucumis melo PE=1 SV=1[more]
PROF_PRUDU6.835e-4674.17Profilin OS=Prunus dulcis PE=1 SV=1[more]
PROF_ANACO6.835e-4671.43Profilin OS=Ananas comosus PE=1 SV=1[more]
PROF3_WHEAT6.835e-4675.42Profilin-3 OS=Triticum aestivum GN=PRO3 PE=2 SV=1[more]
PROF2_PHLPR6.835e-4670.00Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1[more]
PROF3_MALDO8.926e-4671.67Profilin-3 OS=Malus domestica PE=1 SV=1[more]
PROF2_SOYBN8.926e-4673.95Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1[more]
PROF_PRUPE1.166e-4570.00Profilin OS=Prunus persica PE=1 SV=1[more]
PROF_BETVE1.523e-4574.59Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E03-I5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069885 ID=CX069885; Name=CX069885; organism=Citrus sinensis; type=EST; length=641bp
TTTTGAGTATCAACAGTATCCAAAGATTCAAATTCTTCAAAACTGCAATA
CACATAAATTAAGGAAACATGAAGGAATTGGGGATGAAAAAAAAAGATAA
AAAAGGAACCCTAAAGAACCAAAAGAGGCGGGAAAAAAAAAAATCACTCT
TGTCCTCACACAGTTATTTTTGCAGCAAACAAATTTATACTGCCAGTTCA
AGACCAAATATGGAAGAAGAGGCAAAGCCCGAAAACCAGAAAGCAATATA
TCGAAACCATTTGAAGTTGACATGGAATCTACAGGCCCTGATCAATGAGA
TAATCCCCCAACCTCTCAACGATCATGTTGCACTGTCCTGGAGTCAATGG
TTCATCGTATATACCAAAAATCAGGGCTTGGCCCGTTTTCTTGACGGTGA
CACCACCAGAACCCTTTTTTCCACGAATCACAGCTCCAGGCTCACCCTGG
ATTACCATGTACTTGGTGCCTCCAAGGTGCAAACCAGTTGGGGCAAGAGA
ACCGGGCTCTTCAAAATCTTTCATGATTGCAGCAATCTCTTCAGGCTTGA
ACTGAGGGAAATTGGAGCTCTGGGCCCAAACGCTGCCGTCGTGACCGACG
ATCGCAGCTGAGGTGAGATGATGGCCGTCGATATCGCACAT
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