CX069879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_ARCFU (30S ribosomal protein S10P OS=Archaeoglobus fulgidus GN=rps10p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15 Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 175 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 K RI LS N + L+++C+ + A + + GPV +PT+ + + RK+P GEG+ TWD +E+RVHKR+ID+ + ++QI I + V +E+ + Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWDHWEMRVHKRLIDISADERALRQIMRIQVPRDVNIEIVL 104
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METBU (30S ribosomal protein S10P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps10p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15 Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 175 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 K RI LS + NL+ VC + A + + GPV +PTK L + RKSP G+GT TWD +E+RVHKR+ID+ + ++Q+ I + + +E+ + Sbjct: 4 KARIRLSGTSPVNLDGVCDQVKAIANRTGVSISGPVPLPTKKLVVPVRKSPSGDGTATWDHWEMRVHKRLIDIAADERALRQLMRIQVPKDISIEIVL 101
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_NATPD (30S ribosomal protein S10P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps10p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15 Identity = 37/102 (36.27%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 474 + + R+ L+ ++L+ +C D+ A + + GPV +PTK L I RKSP GEGT TW+ +E+RVHKR+ID+ + ++Q+ I + V +E+ + D Sbjct: 1 MQQARVRLAGTAPEDLDDICDDVREIADKTGVTLSGPVPLPTKTLEIPARKSPDGEGTATWEHWEMRVHKRLIDIDADERALRQLMRIQVPNDVSIEIVLED 102
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METTH (30S ribosomal protein S10P OS=Methanobacterium thermoautotrophicum GN=rps10p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15 Identity = 35/100 (35.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 +HK RI L+ + + L VC L + A+ + + GP+ +PTK L + TRKSP GEGT TW+++E+R+HKR++ + + ++Q+ + + V +E+ + Sbjct: 1 MHKARIKLTGTDPEKLAYVCDQLKKIAERTGVDMSGPIPLPTKRLVVPTRKSPDGEGTATWEKWEMRIHKRLVGIEADERAMRQVMKVNVPDNVSIEIEL 100
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METVS (30S ribosomal protein S10P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps10p PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14 Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 + K RI LSS + L+ VC + A+ + + GP+ +PTK L ITTRKS GEG++++DR+ +RVHKRVID+ + +K I + I V++E+ + Sbjct: 1 MQKARIKLSSTKHEELDSVCNQIKAIAEKTGVDMAGPIPLPTKSLKITTRKSTDGEGSSSFDRWTMRVHKRVIDIEADERTMKHIMKVRIPDAVQIEIEL 100
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METTP (30S ribosomal protein S10P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps10p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14 Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 + K RI LS N L+++C + A+ + + GP+ +PTK L + RKSP GEG+ TWD +E+RVHKR+IDL + ++Q+ I + V +E+ + Sbjct: 1 MQKARIRLSGTNPATLDEICNQVRGIAQRTGVHMAGPIPLPTKRLVVPCRKSPDGEGSATWDHWEMRVHKRLIDLDADERALRQLMRIQVPKNVNIEIVL 100
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METKA (30S ribosomal protein S10P OS=Methanopyrus kandleri GN=rps10p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 37/96 (38.54%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 175 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEV 462 ++R+ LSS + LE+VC + + ++ ++ GP+ +PTK L + TRKSP GEG TWD++E+R+HKR+ID+ ++++ I I V VE+ Sbjct: 4 EVRLRLSSTDHYKLEEVCERIKKVVEETGAQMSGPIPLPTKRLLVPTRKSPDGEGKATWDKWEMRIHKRLIDIKGDERTIRRLMRIHIPEEVHVEI 99
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_KORCO (30S ribosomal protein S10P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps10p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = 1 Query: 178 IRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPD--VVKQITSITIEPGVEVEVTI 468 +RI L S N ++LEKV A +RVKGP+ +PTK L +T ++P GEGTN +D++ELR+HKR+ID+ +PD ++ I IT+ V++ + + Sbjct: 5 LRIELVSVNPESLEKVSRMFKEIADKMGVRVKGPIPLPTKRLRVTALRNPSGEGTNRYDKYELRIHKRIIDI-PNPDERYIRSIMGITLPDDVKISIVL 102
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METMP (30S ribosomal protein S10P OS=Methanococcus maripaludis GN=rps10p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.831e-14 Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 + K RI LSS L+ VC + A+ + + GP+ +PTK L +TTRKS GEG++++DR+ +RVHKRVID+ + +K I + I V++E+ + Sbjct: 1 MQKARIKLSSTQHTELDGVCDQIKAIAEKTGVDMSGPIPLPTKALKVTTRKSTDGEGSSSFDRWTMRVHKRVIDIEADERTMKHIMKVRIPDTVQIEIEL 100
BLAST of CX069879 vs. ExPASy Swiss-Prot
Match: RS10_METM5 (30S ribosomal protein S10P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps10p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.831e-14 Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 169 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 468 + K RI LSS L+ VC + A+ + + GP+ +PTK L +TTRKS GEG++++DR+ +RVHKRVID+ + +K I + I V++E+ + Sbjct: 1 MQKARIKLSSTQHTELDGVCNQIKAIAEKTGVDMAGPIPLPTKALKVTTRKSTDGEGSSSFDRWTMRVHKRVIDIEADERTMKHIMKVRIPDTVQIEIEL 100 The following BLAST results are available for this feature:
BLAST of CX069879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069879 ID=CX069879; Name=CX069879; organism=Citrus sinensis; type=EST; length=720bpback to top |