CX069842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_NASOF (Putative membrane protein ycf1 OS=Nasturtium officinale GN=ycf1-A PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 7.876e-70 Identity = 141/270 (52.22%), Postives = 179/270 (66.30%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +K+ N +KEE E A Q SD +K++ S LSN EK+ EENY S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI KRY++K Y++KK ++ I K+Q T NR KNHYD VPE IL PKRRRE R LICFN K +N +N F N + VLD K+L Sbjct: 1482 IPSNEKKSLRFFNLNKEEKESAGQVELESDKEKKINPESALSNHEKNIEENYEESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWNSF--FNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQRIIYRTIGISLVHKNKHKINKRYKKKSYIEKKTIEKSITKYQNKTVNRKKNHYDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFNKNIQNLTTVLDTKKDL 1749
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_POPAL (Putative membrane protein ycf1 OS=Populus alba GN=ycf1 PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.343e-69 Identity = 141/268 (52.61%), Postives = 181/268 (67.54%), Query Frame = -2 Query: 8 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNK 811 IS + + +L NQ+ EE E DQ V L SVL NQEKD EE+Y SD K R KKKQ K TE +LDF LKRYLC QLRW S EKI+N++++YC L+RL NP ++ I+SIQRGE+SL IL+ +K L EL K G+LIIE RLSVKNDG+F +YQ + I LVHK K++I +RY++K Y+DKK+F E I +Q +T N++KN+YDLLVPE +L K RRELR LI FNSKN N + + NN K ++DK+K Sbjct: 1510 ISSNETKSIQLKNQNHEEKESEDQ----------VDLESVLVNQEKDVEEDYVRSDRKERRKKKQYKSNTEAELDFLLKRYLCFQLRWDD--SLNEKIINNIKIYCLLLRLTNPREIIISSIQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQINQRYRKKNYIDKKNFTESIVINQSLTRNKDKNNYDLLVPENLLSSKHRRELRILISFNSKNGNDINTEIINNNNIKNHAHIIDKSK 1765
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_POPTR (Putative membrane protein ycf1 OS=Populus trichocarpa GN=ycf1-A PE=3 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.137e-68 Identity = 139/269 (51.67%), Postives = 181/269 (67.29%), Query Frame = -2 Query: 5 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKN 811 IS + + +L NQ+ EE E DQ V L SVL NQEKD EE+Y SD K R KKKQ K TE +LDF LKRYLC QLRW S +KI+N++++YC L+RL NP ++ I+SIQRGE+SL IL+ +K L EL K G+LIIE RLSVKNDG+F +YQ + I LVHK K++I +RY++K Y+DKK+F+E I +Q +T N++KN+YDL VPE +L K RRELR LI FNSKN N + + NN K ++DK K+ Sbjct: 1512 ISSNETKSIQLKNQNHEEKESEDQ----------VDLESVLVNQEKDVEEDYVRSDRKERRKKKQYKSNTEAELDFLLKRYLCFQLRWDD--SLNQKIINNIKIYCLLLRLTNPREIIISSIQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQINQRYRKKNYIDKKNFNESIVINQSLTRNKDKNNYDLPVPENLLSSKHRRELRILISFNSKNGNDINTEIINNNNIKNHAHIIDKRKH 1768
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_OLIPU (Putative membrane protein ycf1 OS=Olimarabidopsis pumila GN=ycf1-A PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.534e-68 Identity = 140/270 (51.85%), Postives = 179/270 (66.30%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +K+ N +KEE E A Q SD +K+ S L NQEK+ EENY S +K R KKQ K +E +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y+DKK ++ I K+QK T NR KN+YD VPE IL PKRRRE R LICFN K + +N F N + VL K K+L Sbjct: 1474 IPSNEKKSLRFYNLTKEEKESAGQVELESDKEKKRNPESALLNQEKNIEENYAESTIKKRKNKKQYKSNSEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPIRLSVQNDGQLIIYRTIGISLVHKNKHKISKRYKKKSYIDKKKIEKSITKYQKKTVNRKKNNYDFFVPENILSPKRRREFRILICFNLKKKTVRDRNSRFDKNIQNWTTVLHKKKDL 1741
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_BARVE (Putative membrane protein ycf1 OS=Barbarea verna GN=ycf1-A PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.064e-66 Identity = 137/270 (50.74%), Postives = 177/270 (65.56%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +K+ N +KEE E A Q SD + + S L QEK+ EENY S +K R KKQ K TE +LD FL R+ QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI++RY++K Y DK+ ++ I K+Q T NR KN+YD VPE IL PKRRRE R LICFN K +N +N F N + VLDK K+L Sbjct: 1471 IPSNEKKSLRFYNLNKEEKESASQVELESDKENKKNPESALLKQEKNIEENYAESTIKKRKNKKQYKSNTEAELDLFLTRHSRFQLRWN--CFFNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKHKISQRYKKKSYSDKQKIEKSITKYQNKTVNRKKNNYDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFDKNIQNLTTVLDKKKDL 1738
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_CRUWA (Putative membrane protein ycf1 OS=Crucihimalaya wallichii GN=ycf1-A PE=3 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 2.371e-66 Identity = 139/272 (51.10%), Postives = 178/272 (65.44%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKR--KITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +K+ N +K+E E Q SD ++Q S LSNQEK+ EENY S +K R KKQ K TE +LD FL RY QLRW F +KIL++++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y+DKK D+ I K+Q T NR KN+YD VPE IL PKRRRE R LICFN K + +N F N + VL K K+L Sbjct: 1473 IQSNEKKSRRFYNLNKDEKESTGQVEFESDKEQQRNSESALSNQEKNIEENYAESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILDNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKNKDKISKRYKKKSYIDKKKIDKSITKYQNKTVNRKKNNYDFFVPENILSPKRRREFRILICFNFKKKTARDRNSRFDKNIQNLPTVLHKKKDL 1742
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_ARATH (Putative membrane protein ycf1 OS=Arabidopsis thaliana GN=ycf1-A PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.097e-66 Identity = 136/270 (50.37%), Postives = 177/270 (65.56%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +KE N +KEE E A Q SD + + + NQEK+ EEN+ S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++A++SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y++KK F++ I K+Q T N+ KN+YD VPE IL PKRRRE R LICFN K +N N F N + VL K K+L Sbjct: 1464 IPSNEKESLRFYNLNKEEKESAGQVELESDKETKRNPEAARLNQEKNIEENFAESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLNNPNEIAVSSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKHKISKRYKKKSYINKKFFEKSITKYQNKTVNKKKNNYDFFVPEKILSPKRRREFRILICFNLKKKNARDTNSRFDKNIQNLTTVLHKKKDL 1731
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_CAPBU (Putative membrane protein ycf1 OS=Capsella bursa-pastoris GN=ycf1-A PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 4.045e-66 Identity = 138/270 (51.11%), Postives = 175/270 (64.81%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I +K+ N +KEE E A Q SD +K+ S L NQEK+ EEN+ S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI LVHKNK KI+KR ++K Y+DKK F++ K+Q T NR K HYD VPE IL PKRRRE R LICFN K + +N F N + VL K K+L Sbjct: 1469 IPSNEKKSLRFYNLNKEEKESAGQFELESDKEKKRNPESALLNQEKNIEENFAESMIKKRQNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLNNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGIPLVHKNKHKISKRSKKKSYIDKKIFEKSKTKYQNKTVNRKKKHYDFFVPENILSPKRRREFRILICFNLKKKTARDRNSRFDKNIQNLTTVLHKKKDL 1736
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_LIRTU (Putative membrane protein ycf1 OS=Liriodendron tulipifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.177e-65 Identity = 134/271 (49.45%), Postives = 187/271 (69.00%), Query Frame = -2 Query: 5 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKN 811 +S QKEY EL N+++EE E QG LGS N++KD E++Y SD+K R KK+QSK E +L+FFLKRYL QLRW ++ ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQ+ +YQ +GI+LVHKNK + + +EK YVD+ FD IA+H K+ N ++N+Y LLVPE I P+RRRELR LIC NS+N N + +N VFF NN + + LD++K+ Sbjct: 1523 LSSNQKEYLELENRNQEEKEQLGQGN----------LGSDPRNRQKDLEKDYAESDIKKRRKKRQSKSNKEAELNFFLKRYLLFQLRWDDPLN--QRMINNIKVYCLLLRLINPKEIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQWIMYQTIGISLVHKNKYQTNRICREKKYVDENSFDRSIAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENGNVVDRNSVFFNGNNVRNCVQFLDEDKH 1781
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_NICTO (Putative membrane protein ycf1 OS=Nicotiana tomentosiformis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.007e-65 Identity = 137/265 (51.70%), Postives = 181/265 (68.30%), Query Frame = -2 Query: 2 ELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 784 ++ N+ +EE E A QG SD + + LG VLS + +++YT SD K KKKQ K TE +LD FLKRYL QLRW A++ ++++ +++VYC L+RLINPS +AI+SIQR EMSL I++ +K L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY E+ YVDKK+FDEFI + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF NN K + LD+ K L Sbjct: 1577 KIKNRIQEEKEPASQGEKERGSDIENKGNLGPVLSKHQNALKKDYTESDTKKGKKKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMIENIKVYCLLLRLINPSKIAISSIQRREMSLDIMLIQKNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYPEQRYVDKKNFDEFILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSFFNSLNWNGVDRNSVFCNENNVKNWSQFLDERKPL 1839 The following BLAST results are available for this feature:
BLAST of CX069842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069842 ID=CX069842; Name=CX069842; organism=Citrus sinensis; type=EST; length=812bpback to top |