CX069842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_SOLBU (Putative membrane protein ycf1 OS=Solanum bulbocastanum GN=ycf1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.808e-59 Identity = 126/263 (47.91%), Postives = 171/263 (65.02%), Query Frame = -2 Query: 2 ELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNKNL 784 ++ N+S+E E Q SD + + L V S + D E++Y SD K KKQ K TE +LD FLKRYL QLRW A++ +++L +++VYC L+RLINP+ + I+SIQR EMSL I++ + L +L K G+LIIEP RLSVK++GQF +YQ +GI+LVHK+K + +RY+E+ YVDKK+FDEFI + Q N K H+DLLVPE IL +RRRELR FNS N N + +N VF N N K + L + K L Sbjct: 1574 KIKNRSQETKEPPSQRERGSDIENKGNLSPVFSKHQTDLEKDYVESDTKKGQNKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMLENIKVYCLLLRLINPTKITISSIQRREMSLDIMLIQANLPLTDLMKKGVLIIEPIRLSVKHNGQFIMYQTIGISLVHKSKHQTNQRYREQRYVDKKNFDEFILQPQTQRINTEKTHFDLLVPENILWSRRRRELRIRSFFNSLNWNVVDRNSVFCNETNVKNWSQFLGERKPL 1834
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_SOLTU (Putative membrane protein ycf1 OS=Solanum tuberosum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.667e-59 Identity = 126/263 (47.91%), Postives = 171/263 (65.02%), Query Frame = -2 Query: 2 ELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNKNL 784 ++ N+S+E E Q SD + + L V S + D E++Y SD K KKQ K TE +LD FLKRYL QLRW A++ +++L +++VYC L+RLINP+ + I+SIQR EMSL I++ + L +L K G+LIIEP RLSVK++GQF +YQ +GI+LVHK+K + +RY+E+ YVDKK+FDEFI + Q N K H+DLLVPE IL +RRRELR FNS N N + +N VF N N K + L + K L Sbjct: 1574 KIKNRSQETKEPPSQRERGSDIENKGNLSPVFSKHQTDLEKDYVESDTKKGQNKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--KRMLENIKVYCLLLRLINPTKITISSIQRREMSLDIMLIQANLPLTDLMKKGVLIIEPIRLSVKHNGQFIMYQTIGISLVHKSKHQTNQRYREQRYVDKKNFDEFILQPQTQRINTEKTHFDLLVPENILWSRRRRELRIRSFFNSLNWNVVDRNSVFCNETNVKNWSQFLGERKPL 1834
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_SOLLC (Putative membrane protein ycf1 OS=Solanum lycopersicum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.169e-59 Identity = 126/270 (46.67%), Postives = 174/270 (64.44%), Query Frame = -2 Query: 2 PTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNKNL 805 P+ K+ ++ N+S+E E Q SD + + L V S + D E++Y SD K KKQ K TE +LD FLKRYL QLRW GA++ +++ +++VYC L+RLINP+ + I+SIQR EMSL I++ + L +L K G+LIIEP RLSVK++GQF +YQ +GI+L+HK+K + +RY+E+ YVDKK+FDEFI + Q N K H+ LLVPE IL +RRRELR FNS N N + +N VF N N K + L + K L Sbjct: 1572 PSNKK-IKIKNRSQEAKEPPSQRERGSDIENKGNLSPVFSKHQTDLEKDYVESDTKKGKNKKQYKSNTEAELDLFLKRYLLFQLRWNGALN--QRMFENIKVYCLLLRLINPTKITISSIQRREMSLDIMLIQANLPLTDLMKKGVLIIEPIRLSVKDNGQFIMYQTIGISLIHKSKHQTNQRYREQRYVDKKNFDEFILQPQTQRINTEKTHFGLLVPENILWSRRRRELRIRSFFNSWNWNVVDRNSVFCNETNVKNWSQFLGERKPL 1838
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_DRANE (Putative membrane protein ycf1 OS=Draba nemorosa GN=ycf1-A PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.067e-58 Identity = 131/270 (48.52%), Postives = 168/270 (62.22%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 IS +K N +KEEN LA QG SD +KQ SVL NQEK+ +ENY S +K R KKQ K TE +L+ FL RY QLRW ++ +KI+N+++VYC LVRL NP+++ I+ I+RGE+SL IL+ +K F +L K GMLI+EP RLSVKNDGQ +Y+ +GI+LVHKNK KI+KRY+ +DK KN+YD +PE IL PKRRRE R LICFN K +N +N F N K VL K K+L Sbjct: 1481 ISSNEKGSLWFYNLNKEENGLAGQGELESDNEKQRNPESVLLNQEKNIDENYAESKIKKRQNKKQYKSNTEAELELFLTRYSRFQLRWNCFLN--QKIINNIKVYCLLVRLKNPNEITISCIERGELSLDILMIEKNFTFTKLMKKGMLIVEPVRLSVKNDGQLIIYRTIGISLVHKNKPKISKRYKN---IDK------------------KNNYDCFIPENILSPKRRREFRILICFNLKKKNARDRNSRFDKNIKNLTTVLHKKKDL 1727
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_ACOCL (Putative membrane protein ycf1 OS=Acorus calamus GN=ycf1 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.295e-58 Identity = 122/268 (45.52%), Postives = 181/268 (67.54%), Query Frame = -2 Query: 2 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNG--KGGGRVLDKNKNL 799 QK++ E+ NQ KE+ D P Q+ I+ NQ+KD EE+ GS +K R KKK+ K + E +LDFFLK+YL QLRW ++ +K++ +++VYC L+RL N ++AI+SI+RGEM L +++ +K +L+EL K G+ IIEP RLS K DG+ +YQ +GI+LV +NK I R ++KGY D+ F++ + + +KM +R++N YDLLVPE IL P+RRRELR LICFNS N++ + N VF+NN + + LD++K+L Sbjct: 1595 QKKHLEVENQEKEDFRQVDL-RPNPTNQRDPIVSDT-RNQQKDIEEDSVGSGVKKRRKKKKFKSKKEAELDFFLKKYLLFQLRWDELLN--KKMMTNIKVYCLLLRLKNLKEIAISSIERGEMCLDLMLMQKDLSLRELIKKGIFIIEPIRLSRKWDGKLIMYQTIGISLVAENKDPINIRCRKKGYADENSFNKSVRQQEKMLVDRDENDYDLLVPENILSPRRRRELRILICFNSGNESAVDGNSVFYNNKNVESCRQFLDEDKHL 1858
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_ACOAM (Putative membrane protein ycf1 OS=Acorus americanus GN=ycf1 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.295e-58 Identity = 122/268 (45.52%), Postives = 181/268 (67.54%), Query Frame = -2 Query: 2 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNG--KGGGRVLDKNKNL 799 QK++ E+ NQ KE+ D P Q+ I+ NQ+KD EE+ GS +K R KKK+ K + E +LDFFLK+YL QLRW ++ +K++ +++VYC L+RL N ++AI+SI+RGEM L +++ +K +L+EL K G+ IIEP RLS K DG+ +YQ +GI+LV +NK I R ++KGY D+ F++ + + +KM +R++N YDLLVPE IL P+RRRELR LICFNS N++ + N VF+NN + + LD++K+L Sbjct: 1595 QKKHLEVENQEKEDFRQVDL-RPNPTNQRDPIVSDT-RNQQKDIEEDSVGSGVKKRRKKKKFKSKKEAELDFFLKKYLLFQLRWDELLN--KKMMTNIKVYCLLLRLKNLKEIAISSIERGEMCLDLMLMQKDLSLRELIKKGIFIIEPIRLSRKWDGKLIMYQTIGISLVAENKDPINIRCRKKGYADENSFNKSVRQQEKMLVDRDENDYDLLVPENILSPRRRRELRILICFNSGNESAVDGNSVFYNNKNVESCRQFLDEDKHL 1858
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_NANDO (Putative membrane protein ycf1 OS=Nandina domestica GN=ycf1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.541e-57 Identity = 134/273 (49.08%), Postives = 174/273 (63.74%), Query Frame = -2 Query: 2 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEEN----YTG-SDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 799 QK+ EL N KEE + Q SD QKQ GS S Q+KD ++N Y G SD++ R KKKQS +LD FLKRY QLRW ++ +KI+N+++VYC L+RL NP ++AIASIQR EMSL ++ K L +L GMLIIEP RLS+K DGQF LYQ + I+ VHKNK + +RYQEK VDK ++ IA+H+K+ GNR+KN LLV E IL +RRRELR IC NS N N + +NPVF NN + L++ ++L Sbjct: 1524 QKKSLELKN--KEEKKKPAQENIGSDTQKQGNPGSDPSTQQKDIKKNVKEDYDGRSDIQKRKKKKQSTGNIAAELDLFLKRYFLFQLRWDNPLN--KKIINNVKVYCLLLRLKNPKEIAIASIQRDEMSLDVMPISKTLTLAKLINKGMLIIEPARLSIKRDGQFLLYQTITISRVHKNKHQTNQRYQEKRNVDKNGLEKSIARHEKLVGNRDKN--PLLVLENILSSQRRRELRIRICLNSGNVNVVDRNPVFCNGNNASNCDQFLNEERHL 1790
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_LEMMI (Putative membrane protein ycf1 OS=Lemna minor GN=ycf1 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.854e-57 Identity = 126/276 (45.65%), Postives = 185/276 (67.03%), Query Frame = -2 Query: 5 QKEYFELSNQSKEENELA----DQGTP-RSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKR--KITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQN--GMQKNPVFFNNG--KGGGRVLDKNKN 799 +KEY EL NQ+++E + D G+ + D QKQ +++DGE+NYT S +K R KKKQ K + E +LDFFLK+Y QLRW S ++++N+++VYC L+RLIN ++AI+SIQRGEM L +++ +K +L EL K G+ IIEP RLS+K D +FF+YQ +GI+LV+K+K+ + +RY +K Y+D+ FD+ I++H M + +KN+YDL VPE IL +RRRELR LICFNS N + +N +FFN + G+ L K+K+ Sbjct: 1591 KKEYLELENQNQQEKKQKLSQRDLGSDTQQDTQKQ--------KKKEDGEKNYTESTIKKRRKKKQFKSKKEAELDFFLKKYFLFQLRWDD--SLNQRMINNIKVYCLLLRLINLKEIAISSIQRGEMRLDVMLIQKDLSLTELIKRGIFIIEPVRLSIKWDEEFFIYQTLGISLVNKSKQQSETDRRYIQK-YLDENPFDKSISRHSTMLVSEDKNYYDLFVPENILSTRRRRELRILICFNSWKGNVVDVDRNFIFFNENDIRNCGQFLKKDKH 1855
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_NUPAD (Putative membrane protein ycf1 OS=Nuphar advena GN=ycf1 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.225e-56 Identity = 119/269 (44.24%), Postives = 171/269 (63.57%), Query Frame = -2 Query: 5 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN----NGKGGGRVLDKNKN 799 QKEY EL N++++E E QG SD + NQ+KD N TGSD+K R KKK+ K + E +LD LK+Y QLRW SF +++ N+++VYC L+RL++PS++AI+SI+RGEM L +++ K +L EL K G+ IIEP RLS K DG +YQ + I+L HK + + + YQ K ++D+ F+ IA H + N + N+YDLLVPE IL P RRE R + FN +N+N + KNPVFFN N +G + +D++K+ Sbjct: 1558 QKEYLELENRNRDEKERQHQGNLISDTR----------NQKKDVGANSTGSDIKKRRKKKKFKSKKEAELDLLLKKYFLFQLRWGD--SFNQRMTNNIKVYCLLLRLMDPSEIAISSIERGEMGLDVMLIHKDLSLPELIKRGIFIIEPVRLSTKWDGISIMYQTIAISLTHKVQHQTNRGYQAKKHIDENYFNGSIACHGGVRVNGDNNNYDLLVPENILSPNHRREFRIISRFNYRNRNVVNKNPVFFNRAKTNAQGFEKFVDRDKH 1814
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_CERDE (Putative membrane protein ycf1 OS=Ceratophyllum demersum GN=ycf1 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.473e-56 Identity = 123/274 (44.89%), Postives = 172/274 (62.77%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQ--GTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNKNL 811 IS K+Y EL N + +E E + G S+ + + LG L NQ+K+ E +Y GSD+K R KKKQ E +LD L YL QLRW ++ + I+ +++V C L+RLINP ++AI SIQ GEM L ++ ++ +L +L K G+ +IEPRRLS+K DGQF YQ +GI+LVHK K + + Y E Y+D+ DF I++H KM N ++NHYDL+VPE IL +RRRELR C NS N +NPVFF+ N + G+ LD++K L Sbjct: 1577 ISSNPKDYLELDNGTPKEKEKQGKVKGNLGSNQKTRENLGLDLRNQQKNVENDYVGSDIKKRRKKKQFNNNKETELDSILTNYLVFQLRWNPFLN--KGIMKNIKVDCLLLRLINPKEIAIDSIQSGEMHLDLMSIQRDPSLTKLIKDGIFVIEPRRLSIKRDGQFIKYQTIGISLVHKRKYQTNRGYPENKYIDENDFYGSISQHGKMFVNGDENHYDLIVPENILSTRRRRELRIRNCLNSGNTE--NRNPVFFDSTNVRNCGKFLDEDKYL 1846 The following BLAST results are available for this feature:
BLAST of CX069842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069842 ID=CX069842; Name=CX069842; organism=Citrus sinensis; type=EST; length=812bpback to top |